Microbulbifer pacificus: R5R33_13895
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Entry
R5R33_13895 CDS
T09537
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00521
Streptomycin biosynthesis
mpaf00523
Polyketide sugar unit biosynthesis
mpaf00541
O-Antigen nucleotide sugar biosynthesis
mpaf01100
Metabolic pathways
mpaf01110
Biosynthesis of secondary metabolites
mpaf01250
Biosynthesis of nucleotide sugars
Module
mpaf_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
R5R33_13895 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R5R33_13895 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R5R33_13895 (rfbC)
Enzymes [BR:
mpaf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R5R33_13895 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Ppnp
Motif
Other DBs
NCBI-ProteinID:
WOX04824
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All DBs
Position
3257453..3258001
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AA seq
182 aa
AA seq
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MKVIKTSIPDVKIIEPKVFGDERGFFLETFRQEFFNRECAEHTFVQDNHSKSSQGILRGL
HYQTERTQGKLVRVTSGEVFDVAVDLRKSSATFGQWVGVFLSAENKRQLWVPEGFAHGFY
VTSESAEFLYKCTDYYAPEYEHSLRWDDPEIGIEWPLVNGESPKLSSKDAEGKLLKDAAV
FG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaataaaaaccagtattcccgatgtaaaaattatcgagcccaaagtttttggt
gacgaacgcggcttcttcctggaaaccttccgtcaggagtttttcaatcgggaatgtgcc
gagcacacctttgtgcaagataaccacagcaaatcgagccagggaattctccgcggcctg
cattaccaaaccgagagaactcagggcaaactggtgcgggtcacctccggggaagtattc
gacgtagcggtagacctgcgcaagagctccgccactttcggccaatgggtgggggtattc
ctgagcgcggaaaacaaacgccaactctgggtacccgagggctttgcccacggtttctac
gtcaccagcgaatccgccgagttcctgtacaaatgcaccgattactacgctcccgaatac
gaacactcgctgcgctgggacgaccccgaaatcggcatcgaatggcccctggtcaatggc
gaatcgccaaagctatccagtaaagatgccgaaggaaagcttctgaaagacgccgcagtg
ttcggctga
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