Mus pahari (shrew mouse): 110312824
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Entry
110312824 CDS
T05929
Symbol
Rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110312824 (Rnf6)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110312824 (Rnf6)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110312824 (Rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110312824
NCBI-ProteinID:
XP_021042383
Ensembl:
MGP_PahariEiJ_G0024590
LinkDB
All DBs
Position
23:complement(36265972..36279301)
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AA seq
684 aa
AA seq
DB search
MFFKQETRSLRMNPSRSRAGGSGEEISFQENERRWQQERLHREEAYYQFINELSDEDYRL
MRDHNLLGTPGEITSEELQQRLDRAKEQLASPPGSDSGTSDGDSESLRAHSDEDSLLRWL
NTFRRTGNVTRSGQNGNQSWRAVSRTNPNSGEFGFSLEIHINPDSRGSETRGVDSTDTPL
SGASREHRLQRPSSPVASRTRSQTSMSSSGGGSSVSRGRRGVRRQGSVQGSFTTLGRLRN
GIGAALGVRRVSAPRTNVLNTHTNQSDGSFLRQGGRQRFGAAHIWENGARSNVTVRNTNQ
RLEPIRLRPAFSSRSRSPIQRQNGTVHHSSQRQGRQIQQTGRNRSVRHRGVTPVFLEQGR
ERRGADYTPLSNSRLVSRITVEEGESSRSSAATQRHPAITLDLQVRRIRPGETRDRDSIA
NRTRSRAGLAESTVESTSGGFHRTISHLERSGVRTYVSTITVPLRRISENDVVEPSSVAL
RSILRQIMTGFGELSSLMEVEPVSENQSNGQRLPEVFLELSNGDAADVSGQHGRASSQAS
QAQEDSAEMLAVRAPAPPQARPSGSRSRRQLGRADSVVEAGTLPILRLAHFFLLNEGDDD
PIRGLTKEQIDNLSTRSYEQNGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDR
WLSENCTCPVCRRPVLEFGATNSG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgttctttaaacaggaaactagaagtctcaggatgaatccatctagatctagagcaggt
ggtagtggagaagagatctcatttcaagaaaatgagagaagatggcagcaagagcgtctc
cacagagaagaagcctattatcagtttattaatgagctcagtgatgaagattatcggcta
atgagagaccataatcttttaggcacccctggagagataacatcagaggagctacagcag
cgcttagatagagcaaaggaacagctggcatctccgcctggctcggacagcgggacaagt
gatggagactcagaaagccttagagcacattcagatgaggactctctgcttcgatggctg
aacacctttcggcgcactgggaatgtgactcgaagcggacagaatgggaaccaaagctgg
agggccgtgagtcgaacaaacccgaacagtggcgagttcgggtttagcctggagattcac
ataaaccctgacagcagaggttctgaaacacgtggagtggactcgacggacacccctctg
tcaggtgctagcagagagcataggctgcaaagaccatcgagtccagtggctagccgaacc
agaagccagacctccatgagctccagtggtggtggctccagtgtttctaggggcaggcgt
ggtgtgaggaggcagggttctgtgcaagggtcgttcacaaccctgggaaggttaaggaat
ggaattggagcagcccttggtgttcgcagagttagtgcccctcgcactaatgttcttaac
acccacaccaaccagtcagatggtagttttctcaggcaaggtggacggcagcggtttgga
gcagcacatatttgggaaaacggggctagaagtaatgttacagtgaggaacacaaaccaa
agattagagccaataagattacgacctgctttcagtagtcgaagccggtcccccattcag
agacagaatggtactgttcatcatagttcccaaaggcagggtagacagatacagcaaacg
ggtagaaataggtctgttaggcaccgaggtgtaacgccggtctttttagaacaaggtaga
gaacgcagaggtgccgattataccccgctgtccaactcaaggcttgtgtcaagaataaca
gtggaagagggagagtccagcaggtcctcagctgccacccagcgccatccagcaatcaca
ctggacctgcaagtcaggaggattcggcctggagaaactagagatagggatagcattgca
aatagaacccgatctagggcggggctggcagaaagtacagttgagagcaccagtgggggc
ttccacagaactatctctcacttagagcgctcaggtgtccgaacctatgtgagtaccatt
acagttcctcttcgcaggatttctgagaatgacgtggttgagccatcctccgtggctctt
cggtcaattttaaggcagataatgactgggtttggagagctgagttctctaatggaggtg
gaacctgtgtcagagaatcaaagcaatggtcaacgtttaccagaggtgttcctagaactg
agtaatggagatgcagccgatgtcagtggtcagcatggaagagcgtcctcacaggccagt
caggcccaggaggacagtgctgaaatgctagctgtgagggcgcccgccccaccccaggct
cgccccagtggcagtagaagtagaaggcagttaggaagggcagacagtgtggtcgaggct
ggaacgttacccattctgcgcctggctcacttcttcttactgaatgaaggcgatgatgat
ccaattcgtggtttaaccaaagagcagattgacaatctttctaccaggagttatgagcaa
aacggggttgacagtgagttaggtaaggtgtgtagcgtgtgcatcagtgactacgtggct
gggaacaagctccggcagctgccttgtctgcacgagtttcacattcactgtattgatcgc
tggctgtcagagaactgcacctgcccagtctgtcggcggcctgtcttagaattcggggcc
acaaacagtgggtga
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