Mus pahari (shrew mouse): 110313070
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Entry
110313070 CDS
T05929
Symbol
Cstf2t
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110313070 (Cstf2t)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110313070 (Cstf2t)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110313070 (Cstf2t)
U7-dependent histone pre-mRNA processing factors
110313070 (Cstf2t)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110313070
NCBI-ProteinID:
XP_021042762
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Position
1:142645647..142649441
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AA seq
644 aa
AA seq
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MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGGPGPSGPGGPGGPGGPGGPGPAPGLC
PGPNVMLNQQTPPAPQPQHLPRRPVKDIPPLMQTSIQGGIPAPGPIPAAVPGPGPGSLTP
GGPMQPQVGMPVVGPVPLERGQMQISDPRPPMPRGPMPSGGIPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGPPMHHGHDNRGPASHDMRGGPLAADPRMLIGEPRGPMIDQR
GLPMDGRGGRESRGMETRPMETEVLEPRGMERRMETCAMETRGLEARGMDARGLELRGPG
PSSRGPMTGGIQGPGPINMGAGGPQGPRQVPNVAGVGNPGGTMQGAGIQGAGMQGAGMQG
GGMQGAGMQGGGMQGAGMQGGMQGTGMQGGMQGAGMQGASKQGGGQPSSFSPGQSQVTPQ
DQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtccgagacccagccatggatcgatcgctgcgttcggtgttcgtg
gggaacattccgtatgaggcgacggaggagcagttgaaggacattttctcggaggttggt
tccgttgtcagtttccgtctcgtctacgatcgagagactgggaagcccaagggttatggc
ttctgcgagtaccaagaccaagagactgcgctcagtgccatgcggaacctcaatgggcgc
gagtttagtgggagagcgcttcgggtggacaatgccgccagcgaaaagaacaaggaggag
ttaaagagcttaggcccggcggcccccatcattgactccccctacggggaccctattgat
ccagaagacgctccagaatcaatcactagagcagtcgccagcctgcccccagagcagatg
tttgagctgatgaagcagatgaagttgtgtgtccagaacagtcaccaggaagcccggaac
atgctacttcagaacccacagttggcgtatgcgttgctgcaggcacaggtggtgatgaga
atcatggatccagagattgcactgaaaattttgcatcgcaagatacatgtcacaccactg
atcccaggcaaatctcagcctgtctctgggcctggccctggtgggcctggtcctagcggg
cctggcgggcctggtggtcccggcgggcctggcggtcccggccctgcccctggcctctgc
ccaggacctaacgttatgttgaaccaacagactcctcctgcccctcagcctcagcatctg
ccaagaagacctgtgaaggacattcctcctctgatgcagacctctatccagggaggaatt
ccagccccgggaccaataccagctgcagttcctggacctggacctggttccttaactcca
ggaggaccaatgcagccacaagttggcatgccagtggttggtccagtgcccctagagcga
ggacagatgcagatatcagatcctagacctccgatgcctcgtggacccatgccttctggt
ggcataccccctcgaggactactgggagatgctccaaatgacccacgtggagggactttg
ctctccgtgactggagaagtagagcccaggggttatttgggaccaccccatcagggtcct
ccaatgcatcatggtcatgacaaccgtggccctgcctcacatgatatgagaggaggacca
ttggcagcagatcccagaatgctaattggagagcccagaggtcccatgatagatcagagg
ggtctacctatggatggtagaggaggtagagaatctcgagggatggagactcggcccatg
gaaactgaggtcttggagccacgaggcatggagagaaggatggagacctgtgcgatggaa
accagagggctggaagcaagaggcatggatgcaagaggactagagctgaggggccctggc
cctagttccagaggtccgatgactggtggaatccagggtcctggccctattaatatgggg
gcaggtggccctcagggacctagacaggttccaaacgttgcaggagtgggaaatcctgga
ggtaccatgcagggggcaggtatacaaggagcagggatgcagggagcaggcatgcaagga
ggagggatgcagggagcaggcatgcaaggaggagggatgcagggagcaggcatgcaagga
gggatgcagggaacgggcatgcaaggagggatgcagggagcgggcatgcaaggagctagt
aagcaaggtggaggccagcctagcagttttagccctgggcaaagccaggtaactccacaa
gatcaagagaaagcagctttgatcatgcaggttcttcagctgactgcggatcagattgcc
atgctgcctcctgagcaaaggcagagtattttgattttaaaggaacaaatccagaagtcc
accggtgcttcttga
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