Mus pahari (shrew mouse): 110318690
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Entry
110318690 CDS
T05929
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110318690 (Chd6)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110318690 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
110318690
NCBI-ProteinID:
XP_021049556
Ensembl:
MGP_PahariEiJ_G0026048
LinkDB
All DBs
Position
3:complement(143306216..143418358)
Genome browser
AA seq
2711 aa
AA seq
DB search
MKMKIQKKEKQLSKLRALNHSPMSDASVNFDYKSPSPFDCSPDQGENIEEAANHCLPHKD
LYTTEEEADTLFSRKLTSHNGMEDSGGRGTGVKKKRKKKEPGEQEGTKGSKDREPKPKRK
REPKEPKEPRRAKEPKRAKEPKETKQKDGVKKPRKPREASGTKEGKEKRSCTDYGSRTKS
KKASKEQGPTPVERKKKGKRKNETTVESLELDQSLPNPSLQSPEEPSESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQILPEVKHVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSAEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQVQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS
AEQGVTDGTSEIPERGNIDKEDSAEDKLDGLQKQTASPSDGSDGIFGEKKDDSQAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPESLGPCNQGYWVQEEVFRRTSEMDL
INKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRVISRLDKKSDESLEHYFYS
FVAMCRNVCRLPAWKDDGPPDASIYVEPITEERAAKTLYRIELLRKVREQVLTCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAAGSLCCLYQSNSKLYESLTYTPMSRTSESLESEPENLIKMESRDDHLCLPEGGLPD
ITCENFVSKVQEVISLDHDENLLPESLENMIYGKTGLSQEPHSFQEAPNTNTQSRKNTIT
ISASRNESCQPPDIEAEITSASSLMSSLEAGVAKMNIKNGKHLLVSISKEGEPCCSETGR
VPETVGHREAKCLASPTLDTGHESGFVDLCSLSVYDSKRNFSSDQQLIDLLENKSLESKL
ILNQSDEEEEENEDETLAIVASTTEKPEVLDFPKPTANIPRGKNLSFHQDEAKKGKLEVV
SKTAGPQRVFPPPANQCHCKHIERWTHGLGSEESEVEKPKAYQPDLYRSKANNTTVEGEP
AIIPTEPFKLKHELLKEPWKESSEGGKSFSMYVPEGSEPKPEDMDFENKDDYEKDGTCHS
QDYPGKYSEEERKSSASGIAGDLGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRL
DNICHVVLKGKWPCSHQYEPSGALPTPVLSSSAGSRGTLSEPDATEHSFSNGAALAAQIQ
KENFLAPVFTKDEQKHRRPYEFEVERDAKARSLEEYSASHGRPPIVLNGWHSESAIDLSC
SSEESPGTTSPFPASASTPKIGAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDD
AAMRRRRGRRKHIEGGMDLIFLKEQTLPAGILEAHEDAGQTTLSTTHPEVPGAASSAPEP
TAAASSQAEKAVPSKSLLDWLRQQADYSLDVPGFGTNFSDKPKQRRPRCKEPGKLDISSL
GGEERVPAVPKEPGLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRNELLKAPAIVTDSP
SGMGPLFMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKNTLSMLPMM
LPGMAAVPQMFGVGGLLNTPMATTCTTTASASLASTKSGASATEKSTEDKLSGHDVSADT
LVDDQPGPSPFSDQSDPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQA
RHSEMVGLETQKRKKKKTKGDSPTQEPASVCEKEPGSDQNCTESSATVSPEREHVAQARE
EGLKDSNDDTN
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaagagctttgaatcac
tccccaatgtcggatgcctctgttaactttgactacaaatctccgtcaccattcgattgt
agccctgatcagggagagaacatcgaagaagctgccaatcattgtctgccccataaggac
ctctatactactgaagaggaagctgacacccttttttctaggaaattgacatcccataat
gggatggaggatagtggaggccgaggtactggagtaaagaagaaacggaagaaaaaggag
ccaggggagcaagagggaacaaagggaagcaaggacagagagcctaagccaaagaggaaa
cgagaacctaaagagccaaaagaacccagaagggccaaggagccgaagagagccaaggag
cccaaggagacaaagcagaaagatggtgttaagaagccccggaagccccgggaggcctcc
ggtaccaaggaaggtaaagagaagaggagctgcactgattatggatccaggacaaagtcc
aagaaggccagcaaggaacaaggaccaaccccagtggagagaaagaagaaaggaaaaagg
aaaaacgaaaccaccgtggagagtttagagctggaccagagtcttccaaacccatctctg
cagagtcctgaggagcccagtgagtctgcagacagccagaaaaggcgctcaggacggcaa
gtaaagcgcagaaaatacaatgaggacctggacttcaaagtggtggatgatgatggggaa
acaattgctgttctgggagctggccggacatctgcactctctgcttctactctggcctgg
caggctgaggagcctccagaagatgatgccaacataattgagaagatcctggcatccaag
actgtccaggaggttcacccaggagaacctccattcgacctagagcttttctacgttaag
tatagaaatttttcctatttacattgtaaatgggccacaatggaagagttggaaaaggat
ccccgcatcgcacagaagatcaagcgatttaggaacaaacaggcccagatgaagcacatt
ttcactgagcctgatgaagacttgttcaatccagattatatagaaattgatcgtatctta
gaggtggcccacaccaaggatgcagaaacaggggaggaagtaacacattaccttgtaaaa
tggtgctccctgccatatgaagaaagcacctgggagctagaagaagatgtggatcctgca
aaagtgaaagaatttgaatctctacaaattctccctgaagttaaacatgtggaacgacct
gcctctgacgcgtggcaaaaactggagacatcccgtgagtataagaacagtaaccggctg
cgagagtaccagctcgaggggatgaactggcttcttttcaactggtacaacagaaaaaac
tgtatattggctgatgaaatgggcctaggaaaaaccatccagtccatcgcattcctttca
gaaatctttgtcaggggaatccacggcccctttctcatcattgccccactttccaccatc
actaactgggagcgagaattccggacgtggacagagatgaacgctattgtgtaccacggc
agccagatcagcagacagatgatccagcaatacgaaatggtgtacagagatgcgcaggga
aaccccctttcaggagtcttcaagttccacgtcgtcatcacaacatttgagatgatcctg
gcagattgcccagagctgaagaaaatccactggagctgtgtgataattgatgaggcccac
agattgaagaataggaactgcaaacttctggaagggttaaagctcatggccctggaacac
aaagtgctgctcacaggaacacccttgcagaactctgtggaagagctcttcagtttgctt
aactttctggagccctcacagttcccttcagagactgctttcttagaggagtttggcgat
ctcaaaacagaagaacaggtaaagaaattgcagtctatcctaaaaccaatgatgcttcgg
cgcctgaaagatgatgtggagaagaaccttgctcctaagcaagagaccatcattgaagta
gaactgaccaatatccagaaaaagtactatcgtgctatcctagagaaaaacttttccttc
ctgaccaaaggtgcaaatcaacacaacatgcccaatcttatcaatactatgatggagctg
agaaaatgctgtaaccacccctacctgatcaatggggcagaggaaaagattctggaagat
ttcagaaaagcccacagcgctgaagcctctgacttccagctgcaggccatgatccaggca
gcggggaagctggtgctgatagacaagcttctccccaagctcatcgcagggggccacaaa
gtgcttatcttctctcagatggtgcgctgtctcgacatcctggaagattatctcatccag
aggagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgatttgtctttctcctgtgcaccagagcg
ggaggcctgggaatcaatctcacagctgctgatacctgcatcatatttgattctgactgg
aacccacaaaatgacctgcaggctcaggcccgatgtcatcgtataggccagagcaaagcc
gtgaaggtatatcgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggcc
agcctgaagctgggtctggacaaggctattcttcaggacatcaacagaaagggcagcacc
aatggagtacagcaactctcaaaaatggaagtggaagatttgctccggaaaggtgcttat
ggggctttaatggatgaggaagacgaaggctccaagttctgtgaggaagatatagaccag
attctgcagagaagaacccacaccatcaccatccagtcagaagggaaggggtctactttt
gccaaggctagtttcgtggcttcgggaaacagaacagatatttccttggatgatcctaat
ttttggcagaaatgggctaaaatagctgaattagacactgaagcaaataatgaaaaggaa
agcttggtgattgaccggccacgtgtgaggaagcagacaaaacactacaactcttttgag
gaggatgagcttatggagttctcagagttagacagtgactcagatgagaggcccaccagg
tccaggcgcctcagtgacaaagcccgacgctatctccgtgctgagtgcttccgagtggag
aagaacctactcatctttggctggggccggtggaaggacatcctgactcacgggcgattc
aagtggcccctgaatgagaaggatatggagatgatttgcagggccctgctggtgtactgt
gtcaagcattacaaaggggatgaaaaaatcaagagttttatttgggaactaatcacacct
tccaaagacgggcaagttcagaccctccagaaccactcaggcttgtctgccccagttccc
agagggaggaaaggaaaaaagacaaaaaaccagctcttgctcccagaactgaagaatgca
gactggctggccacctgcaatcctgaggtggtcttacatgatgatggatacaagaaacac
ctcaaacagcactgtaataaggtgcttttgagagtccggatgctatactacctaaaagct
gaaatactgggagaagcagctgataaagcattcgagggaactcctgccagagagctggat
gtgcttctgcctgacattgactatgtggagatcccagtggattggtgggatgctgaagct
gataagtcccttctcattggcgtgttcaagcacggttatgagaggtacaatgccatgcgg
gctgacccagcgctctgcttcctggagaaagtcggcatgcctgatgaaaagtccctttct
gcagagcagggtgttacagatggaacttcagaaattcctgaaagaggcaacatagataaa
gaagacagtgctgaggacaagttagatggtctccagaagcaaacggcgagtcccagtgat
ggaagtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggctcc
gacccagacaaatcaccctggccagtttcctctgccctcactgctcgactcaggcgtctg
gtcactatttaccagcgctgcaaccgcaaggagctgtgcagacctgaaagcttaggccca
tgtaaccaaggatactgggttcaggaggaagtgttcaggagaacttcagaaatggacctc
atcaacaaggaagcccaaaaaaggtggactagaagagagcaagctgacttctatagaaca
gtgtcttcctttggtgttgtgtatgaccaagaaaagaaaacctttgactggacacagttc
cgtgtcatttcccgtttggacaagaagtcagatgagagcctggagcactatttttatagt
tttgtagccatgtgtcggaatgtgtgtcgtctccccgcatggaaagatgatggtccccct
gatgccagcatctatgttgagcccatcactgaggagcgggcagcaaagactctgtaccgt
attgaactgctgaggaaggtccgtgagcaggtgctcacatgtcctcaactacatgagcgc
ctccagctttgcaggcccagcctctacctcccagtctggtgggagtgtgggaaacatgat
cgagacctgctcattggcactgccaaacatgggctcaaccgcactgactattacatcatg
aatgacccccagctgtccttcctagatgcctatagaaactatgcccaacacaaaagaact
gacacccaggcagctggaagtctctgctgcctttaccagagcaattctaaactatatgag
tctcttacttacaccccaatgagtaggacttcagagtctcttgaaagtgagccagagaat
ctgataaaaatggaaagcagggatgatcatctctgcctgcctgagggcgggttacctgac
ataacgtgtgaaaactttgtttccaaagttcaggaggtcatttctcttgaccatgatgaa
aacttgctgcctgagtctttggagaacatgatatatggtaagacaggactcagccaagag
ccacattcttttcaggaggccccaaataccaacacacagtccaggaaaaatactatcacc
atctcagccagcagaaatgagagctgccagcctcctgatattgaggcagaaattacttca
gcttcctctctcatgagcagcttagaagcaggagtagctaaaatgaatattaaaaatgga
aaacatttgttggtatctatctcaaaagaaggggagccctgctgcagtgagacaggacgg
gtacctgaaaccgtaggccaccgagaggccaaatgcttagcgtcccctaccttagataca
ggacatgaaagtgggtttgtagatctatgtagtcttagtgtctatgactccaaaagaaac
ttctcctcagatcagcaattaattgacttattagaaaataaaagtttagaaagtaagtta
attttgaatcagagtgatgaggaagaggaagaaaatgaggatgaaaccttagccatagta
gcaagcaccacagaaaagccagaggtcttggatttccccaagcccactgcaaacatccca
aggggaaagaacctcagcttccaccaagatgaagccaagaaaggaaagctggaggtggtg
agcaagactgctggaccacagagggtctttcctcccccagccaatcagtgccactgcaaa
cacatcgaaaggtggacacatggcctggggagcgaggaatctgaagtagagaaacccaag
gcttatcagccagacctgtacagaagcaaagccaataataccacagtggaaggtgagcct
gctattattccaacagagccatttaaactgaagcatgagcttttaaaagaaccatggaaa
gaaagttcagaggggggaaagagtttctccatgtatgttcctgagggaagtgagcccaaa
ccagaagacatggattttgagaataaagatgattatgagaaagatggaacctgccacagt
caagactacccaggcaaatactctgaggaagagaggaagagttcggcatcaggcattgca
ggagaccttggggaagaggcgcaggaagtgcgggctcccaccattgctcagctactgcag
gagaaaaccctctattccttctcagaatggccaaaggatcgtgtgataattaatcgccta
gataatatttgccatgtggtgttaaaggggaagtggccctgcagccaccagtatgaaccc
tcgggtgcactgcccacaccagtgttatccagcagtgcaggttctcgaggcaccctctca
gagccagacgcaacagaacacagcttcagcaatggtgcagcattggcagcccagatccag
aaggagaacttcttagccccagtattcacaaaagatgaacaaaagcacagacgtccctat
gaatttgaggtggaaagggatgccaaagctcggagcctagaagaatactctgcctcccat
gggcgtccgcccattgtcctcaatggctggcattcggagtcagctatagacctctcctgc
tcctcagaggagtctccaggaaccacatctcctttcccagcaagtgccagcacccctaag
attggtgctatcagttcacttcaaggagccctcggtatggacttgtctggaattctgcaa
gctggtctaattcacccagtgactgggcagattgtcaacggaagcctcaggagggatgat
gctgccatgagaaggcggagagggaggcggaaacatattgaaggagggatggacctcatc
ttcctgaaggaacaaacacttccggctggaatcttggaagcccatgaagatgcagggcag
actaccctgagcaccacacaccctgaagtgccaggagctgcttcctcagctcctgagcca
acagcagcagccagcagccaggctgagaaagctgttcccagcaagagcctacttgactgg
ctgcggcagcaggctgactactctttggatgttcctggctttgggacaaatttttcagac
aaacccaagcagaggagaccacgctgcaaagaacctggaaaattagacatcagctctcta
ggtggagaagagagggttcccgctgtccccaaggagccaggactgagggggtttctccca
gaaagcaaattcaatcacaccctagctgagcctgtgcttcgagatgcgggtccccgcagg
agggggaggcggcctcggaatgaactcctaaaagctccagccattgtaacagactctcct
tctggaatgggaccactgttcatgaatgggctgattgcgggaatggacctggtaggattg
cagaatgtgagaaatattccaggcattcctctcactgggctggtgggcttcccagccggt
tttgccaccatgcccactggtgaagaggttaagaacaccctgagcatgctgcccatgatg
ctgccaggcatggctgcagtgccccagatgtttggagttggcggactcctcaacacaccc
atggcaaccacctgcacgaccactgcctcagcgtctcttgcaagcacaaaaagtggtgcc
tcagccactgaaaaatctacagaggacaagctgagtggccatgatgtaagcgcagacact
ctggtagacgatcagcctggccctagtccattttctgatcagtcagatcccacaataact
actagcagtcctgtggctttcaacccatttctcatcccaggagtgtctcctggactcatc
tacccttccatgtttctttcccctggcatgggcatggctctgccagccatgcagcaggcc
agacactcagagatggtcggtcttgagacccagaagaggaaaaagaagaaaacaaagggg
gacagccccacccaagagcctgcatctgtgtgtgagaaggagccaggcagtgatcagaac
tgcaccgagtccagtgccactgtgtccccagagagagaacacgtggcacaggccagggaa
gaggggctcaaagactccaatgatgataccaattag
DBGET
integrated database retrieval system
