Mus pahari (shrew mouse): 110323212
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Entry
110323212 CDS
T05929
Symbol
Trim62
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110323212 (Trim62)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110323212 (Trim62)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110323212 (Trim62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
GlgE_dom_N_S
zf-RING_10
KxDL
Ribosomal_L37ae
U-box
zf-ANAPC11
DUF2383
AAA_13
zf-Nse
DUF1664
Fib_alpha
TMEM191C
Phasin
Prominin
DUF4795
DUF4559
DUF2884
CCDC93_CC
Vps39_1
OmpH
TMPIT
CorA
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
110323212
NCBI-ProteinID:
XP_021056019
Ensembl:
MGP_PahariEiJ_G0028836
LinkDB
All DBs
Position
6:79953040..79980871
Genome browser
AA seq
475 aa
AA seq
DB search
MACSLKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEP
ALAPSLKLANIVERYSAFPLDAILNARRAARPCQAHDKVKLFCLTDRALLCFFCDEPALH
EQHQVTGIDDAFEELQRELKEQLQALQDSEREHTEALQLLKRQLAETKSSTKSLRTTIGE
AFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETD
RHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIHPVPAALTLD
PGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSSGVHYWEVVVAEK
TQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFL
DYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFSPGQSHANGKNVQPLRINTIRI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcagcctcaaggacgagctgctgtgctccatctgcctgagcatctaccaggac
ccggtgagcctgggctgtgagcactacttctgccgccgctgcatcaccgagcactgggtg
cggcaggaggctcagggcgcccgcgactgcccggagtgccggcgcacgttcgccgagccc
gcgctcgcgcccagcctcaagctggccaacatcgtggagcgctacagcgcctttccgctg
gacgccatcctcaacgcgcgccgagccgcgcgaccctgccaggctcacgacaaggtcaag
ctcttctgcctcacggaccgcgcactgctctgcttcttctgtgatgagcccgcgctgcac
gagcaacaccaggtcactggcatcgacgatgccttcgaggagttgcagagagaactgaag
gagcagcttcaggcccttcaggacagcgagcgggagcacacggaggcgctgcagctcctc
aagcgacagctggcagagaccaagtcctctaccaagagcctgcggaccaccatcggggaa
gcctttgagcggctgcaccggctactgcgagagcgacagaaggccatgctggaggagctg
gaggccgacaccgcccgcacactgaccgacattgagcagaaggtccagcgttacagccag
caactgcgaaaggtgcaagagggggcccagatcttgcaggagcggctggcagagactgac
cggcacaccttccttgccggagtggcctccctgtctgagaggctcaaggggaagatccat
gagaccaacctcacgtacgaagacttcccgacctccaagtacaccggccccctgcagtac
accatctggaaatctcttttccaggacatccacccagtgccagctgccctgaccctggac
ccaggcactgcccaccagcgcctgatcctgtcggatgactgcaccatcgtggcctatggg
aacctgcacccacaaccactgcaggactcaccaaagcgctttgatgtggaggtgtcggtg
ctgggctctgaagccttcagtagcggtgtccactactgggaggtggtggtggcagagaag
acccagtgggtgattgggctggcccacgaggctgccagccgcaaaggcagcatccagatt
cagcctagccgcggcttctactgcatcgtcatgcacgacggtaaccagtacagcgcctgc
acagagccctggacgaggctcaacgtccgtgacaagcttgacaaggtgggtgtcttcctg
gactatgaccagggcctcctcatcttctacaacgccgatgacatgtcctggctctacacc
ttccgagagaagttccctggcaagctctgctcctacttcagccccggccagagccatgcc
aatggcaagaatgtccaaccactgcggatcaacaccatccgcatctag
DBGET
integrated database retrieval system
