KEGG   Mus pahari (shrew mouse): 110323572
Entry
110323572         CDS       T05929                                 
Symbol
Smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110323572 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpah03041]
    110323572 (Smndc1)
Spliceosome [BR:mpah03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110323572 (Smndc1)
 Complex B
    110323572 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    110323572 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 110323572
NCBI-ProteinID: XP_021056518
Ensembl: MGP_PahariEiJ_G0014560
LinkDB
Position
1:complement(164537779..164550078)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASAQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAVYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaaacagttggctagctacaaagctcaactccagcaagtagaa
gctgctctttctggaaatggagaaaatgaagatctactgaaactgaagaaggatttgcaa
gaagtaatagaactgaccaaagaccttctgtcaactcagccttcggagacgcttgcaagc
tcagacagttttgcttctgctcagcccactcattcatggaaagttggggacaagtgcatg
gccgtgtggagtgaagacggacagtgttatgaagcggagattgaagagatagatgaagaa
aatggcaccgccgcaatcacctttgctgtttatggcaatgccgaagtgactccgttgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaagaggacagcggcaacaagcccatg
tcaaaaaaagaaatgatcgcccagcagcgtgaatataaaaagaaaaaagctttgaaaaaa
gcacagagaataaaagagcttgagcaggagcgagaggaccagaaggtgaaatggcagcag
ttcaacaacagggcgtactcgaagaacaagaaaggccaggtaaagaggagtatttttgct
tctccagaaagtgtaacgggcaaagttggagtaggaacttgtggaattgctgacaagccc
atgacacagtatcaagatacatccaagtacaatgtcaggcatttgatgcctcagtaa

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