KEGG   Mus pahari (shrew mouse): 110324423
Entry
110324423         CDS       T05929                                 
Symbol
Tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110324423 (Tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110324423 (Tdp1)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110324423 (Tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 110324423
NCBI-ProteinID: XP_021057644
Ensembl: MGP_PahariEiJ_G0029775
LinkDB
Position
7:94383129..94451409
AA seq 609 aa
MSQESSYGKWTISSSDESEDEKPKPDKPSTSSLPKAGQGVSKEPTYTCSEARKAAHKRQI
SPVKFSSTDSVLPHKKQKTDSPEGLGWCLSSSDDEQQPDVTPQEQPQRVLPQEKNHVSSP
NVTSAQKVVDRSPPASLKPQRADDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKAKYN
SKALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKKPILLVHGDKREAKAGLH
AQAKPYVNISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGIWLS
PLYPRIDQGSHTSGESSTRFKADLTSYLRAYNAPPLQEWIDIIQEHDLSETNVYLIGSTP
GRFQGSHKDNWGHFRLRKLLQAHAPSAPKGECWPIVGQFSSIGSLGPDESKWLCSEFKDS
LLALREDGQPPGKSAVPLHLIYPSVENVRTSLEGYPAGGSLPYGIQTAEKQRWLHSYFHK
WSAETSGRSNAMPHIKTYMRPSPDFSKLAWFLVTSANLSKAAWGALEKNGTQLMIRSYEL
GVLFLPSAFGLDTFKVKQKFFSSSCEPTASFPVPYDLPPELYGSKDRPWIWNIPYVKAPD
THGNMWVPS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgtcccaggaaagcagctacgggaagtggacaatatccagtagtgatgaaagtgaggat
gagaagcccaaacctgacaagccatcaacatcctctctccccaaggctgggcagggagtg
tcgaaggagcccacatacacctgctcagaggcccggaaggctgcacacaagagacagatc
tcacctgtgaagttcagcagcacagactcggtgctaccccacaagaagcagaagactgac
tccccggaaggtctcggctggtgtctctccagcagcgatgatgaacagcagccagatgtg
acaccgcaggagcagcctcagagagtgctgcctcaagagaaaaaccatgtctcctcaccc
aatgtgacttctgcccagaaagttgtggatagaagccctcctgccagccttaagccccaa
agggcagacgatgagtacgagacctcaggggaaggccaggacatctgggacatgctggat
aaggggaaccccttccagttttatctcactagagtctcaggaattaaggcaaagtacaac
tccaaagccctccacatcaaggatattttatcccctctgtttgggacacttgtctcttca
gctcagtttaactactgctttgacgtggactggctcataaagcaatatccaccggaattc
aggaaaaaaccgatcctgcttgtgcatggtgataagagggaagccaaggcaggcttacat
gctcaggcaaagccctatgtgaacatttccctctgccaggcaaagttggatattgcattt
ggaacacaccacacgaaaatgatgctcttgctctatgaagaaggcctccgagttgtcatc
cacacctccaacctcatccgggaagactggcaccagaaaacccaaggaatatggttgagc
cctttgtacccgagaattgaccagggaagccacacatctggagagtcaagcacccgtttc
aaagctgacctcaccagttatctgagggcgtataatgctccccctctgcaggagtggata
gacatcatccaagagcacgatctctcggaaaccaatgtttaccttattggttcaacccct
ggacgctttcaaggaagtcacaaagataactggggacattttaggcttagaaagctcctg
caggcgcatgccccgtctgcacccaagggtgagtgctggcccatcgtgggtcagttctca
agcatcggctccctggggcctgatgaatccaagtggctgtgctcagagtttaaagacagc
ttgctggcactgagagaggacggccaacctccgggcaaaagtgcagttcctcttcatctg
atctatccctctgtggaaaatgtgcggaccagcttagaaggataccctgccggaggctct
cttccctatggcatccagacggctgaaaagcagaggtggctacactcctacttccacaag
tggtcagcagagacatccggccgaagcaatgccatgccgcatattaagacgtacatgagg
ccctcgccagacttcagtaaactggcttggttcctggtcacaagtgcgaatctgtccaag
gctgcctggggggcactggagaagaacggcacccagctgatgatacgctcctacgagctc
ggggtcctcttcctcccgtcggcatttggcctggacaccttcaaagtgaaacagaaattc
ttctccagcagctgtgagccgacagcctcctttcctgtgccctatgacctgcccccagag
ctctacgggagtaaagatcggccttggatttggaacattccttatgtcaaagcacctgac
acgcacggcaacatgtgggtgccctcctga

DBGET integrated database retrieval system