Mus pahari (shrew mouse): 110328820
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Entry
110328820 CDS
T05929
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110328820 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110328820 (Ttc37)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110328820 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_16
TPR_14
TPR_17
TPR_8
TPR_11
TPR_12
TPR_9
Sel1
ANAPC3
Fis1_TPR_C
TPR_15
Sey1_3HB
BTAD
EST1_DNA_bind
Retrotran_gag_2
TPR_20
TPR-S
Motif
Other DBs
NCBI-GeneID:
110328820
NCBI-ProteinID:
XP_021063951
Ensembl:
MGP_PahariEiJ_G0015814
LinkDB
All DBs
Position
11:8030255..8135729
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALRSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPEQLLAWQGLASLYEKCNHINAKDDLPGVYRKLLDLYESVDRQKWCDVCK
KLVALYHQEKKQLEVAQTWYRLIKTRQEDGADRQELYELWRKLSQLLAENIEDQNNETQQ
MLLTAFENALDLADNIPSEDHQVLYRNFIQCLSKFPHETTKLKKACEEMITIYPTVQYPL
EVICLYLIDSGSLTDEGHQYCCKLVEMNSKSGPGLIGLGVIAFQHKKYEDAVSHLTEGLK
ESPLCIAGWCRLAEAQVKTHRPKEAILSCNEALKTIDNFGASGGSLHQKNLCLRLKAEAL
LKLSDCASSEEAVRTLDQVSDIDNTPGLLVLQGLACLNTGAVDKATKIMEDLVTSHPDLA
EAHALKARVHFTKKEYVQAEMSFQRALEKDAEVAEYHYQLGLTYWFMGEETRKDRTKALT
HFLKAARLDAHMGKVFCYLGHYYRDVAGDRNRARGCYRKAFELDDSDAESGAAAVDLSLE
LEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQAALRADPKDCNC
WESLGEAYLSRGGYTTALKSFMKASELNPDSTYSVFKVAAIQQILGRYSEAIAQYQLIIK
MKEDYVPALKGLGECHLKLGKMALVDFLDGKAVDYMGQALGYFTRALQHRADVSCLWKLV
GDACTCLHPVSPSKVHVPVLGALLGQQEGQEVLKKDELLRLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQHLAETGSSMNDLTELLEKSLHCLKKAVRLDSNNHLHWNALGVVACYSGV
GNYALAQHCFIKSIQTEQINPAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAERVGSFDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILEMN
AIPAAQGVLCKYVERIQNSASAFTMLGYLNEHLQLKREAAEAYQRATALLHSAEDQHTYN
ITVRNWGRLLCSIGDCDRAIQAFKSTPLVELEDIIGFALALFMKGLYKESGSAYERALAV
CKSEQDKAHILTAMAIMEYKQGKMDAAKSFLFKCSILKEPTTESLQALCALGLAMQDATL
SKAALNELLKHIKRKNDYHRCLLTSAVYALQGRSVAVQRQVAKAVHSNPADPALWSLLSR
IVAQYTQRSAKGGAVAGNVAHILDLNHGKKALLYTAVNQLAMGSSTAEDKSNTALKTMQK
AAFLSPDDPAVWAGLMAACHADDKLALLSNTQPKRVDLYLALQSAVAASLKDKETLQNYN
QSLEKWSFSQAVTGLIDTGKTSEAESLCTQSLKSNPDQPAVILMLRQVQCKSLLKSQKPL
PDAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQGDWSGKLS
SLLKLALLALEVCMANVSGDHWSSLVQEATSEALKVCFTPLAIFLQALLQFNRKMGARET
RRLLERVVYQTGYPSSIVSTARWYLLRHLYAKDDHELIDVLVRNAEIHGDKRSLELNRKL
SAQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaagaagtgaagactgctctaagaagtgcaagagatgcaatcagaaacaaa
gagtacaaagaagctttgaaacactgcaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgaactagaacagcctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccggaacagctactcgcttggcagggtcta
gcaagtttgtatgagaagtgtaatcacataaatgctaaggatgatttacctggtgtttac
cgaaagctgctggatctctatgaaagtgttgacagacagaagtggtgtgacgtgtgtaag
aagctcgtggctctctatcaccaggaaaagaaacagctagaggtggctcagacatggtat
agattgataaagactcggcaggaagatggagcagacagacaagagctttatgagctgtgg
agaaaattgagtcagttgctggctgagaatatagaagatcagaataatgagacccagcag
atgcttttaactgcatttgagaatgcactggacttagcagataacattcccagtgaagat
caccaagtactttacaggaatttcattcagtgtttgtctaaatttcctcatgagacaact
aagttgaagaaggcctgtgaagaaatgataactatctatcctactgtacagtacccacta
gaagtgatttgtttgtacttaattgactcagggagcctgaccgatgagggacaccagtat
tgttgcaagctagtggaaatgaattcaaaaagtggtccaggccttattggcttaggcgtt
atagctttccaacacaagaagtatgaagatgctgttagtcatctaacagaaggcttgaag
gaaagccctctctgcatagctgggtggtgtcgtctagcagaagcccaagtcaaaacgcac
agacccaaggaagctattctttcttgtaatgaagctctgaagaccatagataactttggt
gcatcaggtggcagtcttcatcagaagaatctttgtcttcgtctgaaagcagaggctttg
cttaaactctcagattgtgcatcttcggaggaggcagttcgtacccttgatcaggtttct
gacatagataataccccaggactgctggttctccaaggcctcgcctgtctgaacacagga
gctgtggacaaggctacaaagatcatggaagatcttgtaacctctcacccagatctggct
gaggctcacgctctgaaggctcgggttcactttactaagaaggagtacgtgcaagcagaa
atgagtttccaaagagcacttgagaaagatgctgaagttgctgagtatcattaccagctt
ggattgacatactggttcatgggtgaagaaacaagaaaagacagaacaaaggcgcttacc
cactttctaaaggctgcgagactggatgcacacatgggtaaagttttctgctacttaggc
cattattaccgagatgtggctggagatagaaacagagcccgagggtgttacaggaaagct
tttgaattagatgacagtgatgctgagtctggagctgctgcagttgacttgagcctggag
cttgaagacacggaaactgctttagctatcttgacagcagtaactcagaaggcgagtgct
ggagcagcaaagtgggcatggctgaggagaggactgtaccatttgaaagctggtcaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggactgcaattgc
tgggaatccttaggagaggcgtacttaagcagaggtggttacacaacagccttgaagtct
tttatgaaagccagtgagctcaacccagactccacatacagtgtgtttaaggtggcagcg
atacagcaaatcctaggcaggtattcggaggccattgcgcagtatcagctgatcattaaa
atgaaagaagattatgtacctgccttaaaaggtttgggtgagtgccacctgaagctgggg
aagatggccttagtggattttctggatggaaaagctgtggactatatgggacaagcgctg
ggatatttcacccgggccctgcagcatcgagctgatgtgtcttgcctttggaagcttgtg
ggagatgcctgtacctgtctgcatcccgtttcgccatctaaagtgcatgttcctgtctta
ggagcccttctcggccaacaagaaggacaagaagtcttaaagaaagatgagctcctgcgg
cttggaggaaggtgttatggtcgtgcattgaagttgatgtctacatctaatacatggtgt
gatcttggaattaattattaccgtcaagtacaacatctagcagaaacaggcagcagcatg
aatgatcttactgagttactggagaaatctttgcattgtctgaaaaaggcagtgaggctg
gacagcaataatcacttacactggaacgctcttggtgtggttgcatgttactctggagtt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccagacagaacaaattaac
cctgctgcatggaccaacttaggagtgttatacctcgcgactgaaaacatcgagcaagcc
catgaagcattcaaaatggctcagtcccttgatccatcttatttattgtgctggattgga
caggctcttattgcagaaagagttggaagttttgataccatggatctcttcagacacact
acagagctcagtatgcatactgaaggagcaataggttatgcatattgggtttgtacaaca
ttacaagacaaaagcaacagagaaacagagctctaccagtacaacatccttgagatgaat
gctatccctgcggcacagggagttctgtgtaaatacgtagaaagaattcagaattccgct
tcagctttcacaatgttgggttatttaaacgagcatctgcagttgaaaagggaagcagcc
gaggcgtaccaaagggcaactgcactgttacattctgctgaagaccaacatacttacaac
attacagtaagaaactggggcagattgttatgctccattggtgactgtgacagagctatc
caggcctttaagtcgacgccccttgtggagctggaggacatcattgggtttgcattggca
ttgtttatgaagggcctgtataaagagagcggttcagcctatgagagagccttggctgtt
tgtaaatcagagcaagacaaagctcacatcttgacagctatggcaataatggaatataaa
caagggaaaatggatgcagccaagtcatttctcttcaaatgctctattttaaaggaacca
actacagaaagtcttcaagcactgtgtgctctagggttggcaatgcaggatgccacactg
tcaaaagcagcactgaatgagttactgaagcacatcaaacgcaagaatgattatcacagg
tgccttcttacgtcagcagtttacgcactgcagggccgcagtgtggcagtgcaaagacaa
gtggccaaggctgtgcacagtaaccctgctgaccctgctctgtggtctttgctatctcga
attgttgctcagtacacacagcggagcgcaaagggaggtgctgtagctggcaacgtggct
catattctggatttgaatcatggaaagaaggcattattgtacactgcagtgaaccagctg
gccatgggaagcagtacagcagaagataaaagcaatactgctctaaagaccatgcagaag
gcagccttcctttctccagatgaccctgctgtctgggctgggctgatggcagcctgccat
gccgacgataaactggctttactcagtaacactcagccaaagagggtagatttgtacttg
gctttgcagtctgctgttgctgcttcacttaaggacaaagaaactttgcaaaattacaac
cagtcacttgaaaagtggtctttctcacaagctgtcactggtctgattgacacaggaaaa
acatctgaagctgaatctctgtgcacacagagtttgaaaagtaaccctgatcagccagct
gttatcttaatgttgagacaagttcagtgtaaatcactcctgaagtcacaaaagcccctc
ccagatgctgtactggaagaactgcaaaagacagtcatgtccaactctacctctgtcccg
gcatggcagtggttggcacaggtttatcagtcccaaggaatgatgggtgctgcagagatg
tgttacagaaagagtctccaagtggcatcccaacagggcgactggagtgggaagctctct
agtctgttgaagctagcccttcttgcattggaagtgtgcatggctaatgtttcaggtgat
cactggtcatccttagttcaagaagccacaagtgaggccttgaaggtttgctttacccca
ctggctatcttcttgcaagcattgttacagttcaaccgtaagatgggagcaagagagaca
cggcggcttttggagagagtagtgtaccagactggataccccagctcaattgtatcaacc
gctcgttggtacctcttaagacacctctatgcgaaagatgaccatgaactaattgatgtg
ctggtgaggaatgcagagattcacggtgataaaagaagtttggaactgaatcggaagctg
tcggcacagtga
DBGET
integrated database retrieval system
