Mus pahari (shrew mouse): 110336744
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Entry
110336744 CDS
T05929
Symbol
Tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110336744 (Tmc4)
03037 Cilium and associated proteins [BR:
mpah03037
]
110336744 (Tmc4)
Transporters [BR:
mpah02000
]
Other transporters
Pores ion channels [TC:
1
]
110336744 (Tmc4)
Cilium and associated proteins [BR:
mpah03037
]
Other cilia and associated proteins
Stereociliary proteins
110336744 (Tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
RSN1_7TM
Motif
Other DBs
NCBI-GeneID:
110336744
NCBI-ProteinID:
XP_021075132
Ensembl:
MGP_PahariEiJ_G0020966
LinkDB
All DBs
Position
19:complement(535684..549063)
Genome browser
AA seq
698 aa
AA seq
DB search
MEESPREAWGQSPAWSSSRKARTGPSLASVLNDLPSAATLRYRGPGVLPWGTLDEDDDGG
RSLQAFAETAQMESHPSRELPWPMQARRAHRKSQATGQVASGSESRAAYWTRQLSRTKGK
MKEGFQTIQPWAWTLKKIGGQFGAGTESYFSLLRFLLFLNLVASVIEICMKLIPTWLEGA
PPGPPGPNISSSCGSYIPHTHGLVAFPTQLFNLLSGEGYLEWSPLFYGFYPPRSNLAITY
LCSVFAISLIYLLCILRRSVSGLKETLLAESDILTSYSHRVFSAWNFGLCGDMHVQLRQR
IILHELQVDLEEAIVRRRAAEQTLSQRAKVWSMRVLLNVLVLALLGAAFYGIYWATEYTL
TLQETPLVQQTPLLKLLVNYLPSIFISVFNFVLPPVFKFIASLEGYTQSRQIVMILLRTV
FLRLASLVFLLFSLWNQITCGGNMEAEECKACGYNYKEIPCWETRLGQEMYKLVIFDLLM
GLLVTLLVQFPRKILCGLCPGALGRLSGTLEFQVPDEVLGLIYAQTVVWVGSFFCPLLPL
INTAKFLILFCLKKMTLFSIYSPASRTFRASTANFFFPLILLVGLAISAVPVLYSIFLIP
PSKLCGPFRGKLSIWAQIPESIESLPQTAQNFFYFLGTQAFTVPLLIVSSILMMYTVALA
NCYGRLISELKRQIETEMQNKVFLAQRAVALSSTNGAS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagtcccagggaagcctggggccaatccccagcctggtctagctcccggaaa
gccagaacaggcccatcactggcatctgtgctgaatgatctccccagtgctgctacgctt
cggtaccgcggccctggtgtgctcccttggggaacactggatgaagatgatgatggagga
aggagccttcaggcctttgcagaaactgcgcaaatggaatctcacccttcccgggaactt
ccctggcctatgcaggcaaggcgggcacacaggaagagccaggctacagggcaggtggct
tctggatctgagtctagggctgcctactggacccgacagctttcccggaccaagggaaaa
atgaaagaaggctttcaaactatacagccctgggcatggacgctgaagaaaattgggggt
cagtttggagcaggcactgagtcctacttctccctgctgcgtttcctgctctttctcaac
ctggtggcatccgtgattgaaatctgcatgaagctgatccccacctggttggaaggggct
cctccaggtccccctggccctaacatctcttcatcctgtggttcctatattccacacact
catggcctggtcgccttccccacccagctcttcaacttgctctctggagagggttaccta
gagtggtcccctctattctatgggttctacccaccccgatcgaacctggccatcacctac
ctgtgctccgtctttgccatcagcctcatctacttgctgtgcatcctacgccgttcggtg
tccgggttgaaggagacactgttggccgagtcagacattctgaccagctacagtcaccga
gtgttctcagcttggaattttggcctctgcggggacatgcacgtgcagctgcgccagcgc
atcattttgcatgaactacaggtggacctagaggaagcaatagtccggcgccgtgctgcg
gagcagaccctgagccagcgagccaaggtgtggtcgatgagggtgctgctcaacgtgctg
gtcctcgcgctgctcggggcggccttctatggcatctactgggccaccgagtacaccttg
acacttcaggagaccccgctggtccagcagaccccgctactcaagcttctggtgaactat
cttccatccatcttcatttctgtgttcaactttgtgctgcctcctgtgttcaagttcatt
gcctcactagagggctacactcagagccgacagatcgtcatgatcctgcttaggactgtg
tttttgcgtctggcctcgctggtgttccttctgttctctctgtggaatcagatcacgtgt
gggggaaacatggaggcagaagaatgtaaggcctgcggctacaattacaaagaaattccg
tgctgggagactcggctgggccaggagatgtacaaacttgtgatctttgatctgctgatg
ggcctgttggtcacactgttggtccagtttcctaggaagatactctgtggcctctgtcct
ggggcactgggtcgtctgtcgggaaccctggagttccaggtgccagatgaggtgcttggg
ctcatctatgctcagaccgtggtctgggtgggaagctttttctgccctttactacctttg
atcaacactgccaagtttctcatacttttctgcctgaagaagatgacgctcttctccatc
tactcgccggcttcccgcaccttccgagcatccacagcaaatttctttttccccctgata
cttcttgtgggtctggcgatctctgctgttcccgtgctttacagtatcttcctgatccca
ccttctaagctgtgtggccccttccgagggaagttgtccatttgggcccagatccctgag
tccattgagagcctccctcagactgcccagaactttttctactttctgggaacccaagct
tttactgtacctcttctgatcgtctctagcatcctgatgatgtatactgtagccctggct
aactgttacggacgcctcatctctgagctcaaacgccagatagagacggaaatgcagaat
aaagtcttcctggcccagcgagctgtggctctgagctcaacgaatggagcttcctga
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