Mus pahari (shrew mouse): 110337092
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Entry
110337092 CDS
T05929
Symbol
Usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110337092 (Usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110337092 (Usp47)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110337092 (Usp47)
Peptidases and inhibitors [BR:
mpah01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110337092 (Usp47)
Ubiquitin system [BR:
mpah04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110337092 (Usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
110337092
NCBI-ProteinID:
XP_021075500
Ensembl:
MGP_PahariEiJ_G0013544
LinkDB
All DBs
Position
1:81844748..81928162
Genome browser
AA seq
1375 aa
AA seq
DB search
MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQIENAAEEPRVLCIIQDTTNSKTVSERI
TLNLPASTPVRKLFEDVANKVGYINGTFDLTWGNGVNTADTAPLDHTSDKSLLDANFEPG
KKNFLHLTDKDGEPPQMLLEDSNNVDDSVHDRFIGPLPREGSVASTNDYVSQSYSYSSIL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEDSEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEELDMSTF
IDIEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLESSSGSEKISKPGL
EKNSLMYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIKKTHGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEVDEYPEHIKNLVQKERELEEQEKRQR
EIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEDVIPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRKPDQIFQSYKPGEVMVKVHV
VDLKAETVAAPVTVRAYLNQTVTEFKQLISKATHLPADSMRIVLERCYNDLRLLSMPSKT
LKAEGFFRSNKVFVESSETVDHQAAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRT
AYQKAGGDSGNVDDDCERVKGPAGNLKSVDAILEESTEKLKSLSLQQQQDGDNGDSSKST
ETSDFENIESPLNERGSSTSVDNRDLDQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNADSAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYD
ESGKSRGDMQYMYFKADPYTADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHF
KVFRVYTSNQEFETVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVCQLLVNEQEPCKF
LLDAVFAKGMTVRQSKEELIPQLREQCGLDLSIDRFRLRKKTWKNPGTVFLDYHIYEEDI
NISSNWEVFLEVLDGVEKMKSMSQLAILTRRWRPAEMKLDPFQELVLESNSVDELREKLS
EISGIPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDK
TEEVMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDVAQD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaggaggatgtgttttggagatgcaga
caaaatatctttgatgaaatgaagaagaaatttttacagatagaaaatgctgctgaagaa
cctagagtcttatgtataatacaagacactactaactcgaagacagtgagtgaaaggatc
acattaaatttaccagcgtctaccccagtccgaaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttgacatggggaaatggagtcaatactgctgat
acggcaccactggatcacaccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaaccgcctcagatgttgctggag
gactccaataacgtggatgacagcgtacatgacaggttcataggtccacttccaagagaa
ggttctgtggcctctaccaatgattatgtcagccagagctactcctattcatcaattttg
agcaagtcagaaactggttatgtgggattagtaaaccaggcgatgacatgctatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgcattatataagtgggaa
tttgaagactctgaagaagatcctgtgacgagcattccataccagcttcaaaggcttttt
gttttgttacaaaccagcaaaaagagagcaattgagaccacagatgttacaaggagcttt
ggatgggatagcagtgaggcttggcaacagcatgatgtacaagaactgtgccgtgttatg
tttgatgctttggaacagaaatggaagcaaacagaacaggctgatcttataaatgagctg
taccaaggcaagctgaaagactatgtgaggtgtctggaatgcggttatgaaggctggaga
attgacacatatcttgatattccactggtcatccgaccttatgggtctagccaagcattt
gctagtgtggaagaagcattgcatgcatttattcaaccagagatcttggatggcccaaat
caatatttttgtgaacgttgtaagaagaagtgtgatgcacgtaagggccttcggtttttg
catttcccctatctgttgaccttacagttgaaaaggtttgattttgattatacaaccatg
catagaattaaactcaatgatcgaatgtcatttccggaggagctggatatgagcacattt
attgatattgaagatgagaaatctcctcagactgaaagttgcactgatagtggagcagaa
aatgaaggcagttgccacagcgaccagatgagtaatgatttctccacggatgatgcggtt
gatgaagggatttgcctggagagcagtagtgggagtgagaagatttcaaaacctggcctg
gaaaagaactctctgatgtatgaactcttctcagtgatggtgcattcagggagtgctgct
ggaggacactattatgcttgcataaagtctttcagtgatgatcaatggtacagtttcaat
gaccaacatgtgagcaggataacacaagaagacattaagaagacacatggtgggtcttca
ggaagcagaggctactactccagtgcttttgcaagctcaacaaatgcatatatgctgata
tacagactgaaggatccaacaagaaatgcaaaatttctagaagtggacgagtacccagaa
cacattaagaatctggtgcagaaggagagagaattggaagaacaggaaaagaggcaacga
gaaattgaacgcaacacgtgcaagataaaattattctgtttacatcctgtgaaacaagta
atgatggaaaacaagttggaggttcataaggataagacattaaaagaagccgtggaaatg
gcttataagatgatggatttagaagatgtgattcccctggattgctgtcgcctggtaaaa
tatgacgagtttcatgattacctggaacgatcgtatgagggagaagaagatacgccaatg
gggctgcttctaggaggagtcaagtccacatacatgtttgatctgctgttggaaacaaga
aagcctgatcaaatttttcagtcttacaaacctggagaagtgatggtgaaagttcatgtt
gttgatctgaaggcagagactgttgctgctcctgtaacagtgcgtgcgtatttaaatcag
acagttacagagttcaaacagctgatctcaaaggccacacacttacctgcagactccatg
aggatagtgctggaacgctgctacaatgacctgcgccttctcagcatgcccagcaagacc
ctgaaggcagaaggcttcttcagaagtaacaaggtgtttgttgaaagctctgagacagtg
gatcaccaggcagcctttacagactcccacttgtggaaactcctggatcgacatgcaaat
acaatccggttatttgttttgctgcctgaacaatctccaggatcatattcaaaaaggaca
gcataccagaaagctggaggtgattctggtaatgtggacgatgattgtgaaagagtcaaa
ggacctgcagggaatttaaagtctgtggatgctattctagaagagagcactgaaaaactc
aaaagcttgtcactgcagcagcagcaagatggggacaacggagacagcagcaaaagcact
gagacaagtgactttgaaaatattgaatcacctctcaatgagaggggctcttccacctct
gtggataatcgagatcttgaccagcacattcagacttctgacccagaaaactttcagtct
gaagaacgctcagactcagatgtgaataatgaccggagtacaagttcagtagacagtgat
attcttagctccagtcacagcagcgacactctgtgcaatgcagacagtgctcagattcct
ctggccaatggactcgactctcacagtatcacaagtagtagaagaactaaggcaaacgaa
gggaaaaaggagacctgggacacagctgaagaagactctgggactgacagtgaatatgac
gagagtggcaagagcaggggggacatgcagtacatgtacttcaaagctgacccctacact
gcggacgaaggctctggggaaggacacaaatggttgatggtgcatgttgataagagaatc
accctggcagctttcaaacagcatttagaaccctttgttggagtcctctcctctcacttc
aaggtttttcgagtgtacaccagcaatcaagagtttgagaccgtccggttgaatgagacc
ctttcatcattttcagatgacaataagatcacaatccgactggggagagcactgaagaag
ggagagtacagagttaaagtgtgccagctcttagtcaatgagcaagagccatgcaagttt
ctgctagatgctgtgtttgctaaaggcatgactgtgcggcaatcgaaagaggagctgatt
cctcaactcagggagcagtgtggcttagacctcagcatcgacaggtttcgtctaaggaag
aaaacatggaagaatcctggcactgtctttttggattatcatatttatgaagaagatatt
aatatttccagcaactgggaagttttcctggaagttcttgatggtgtggagaagatgaag
tccatgtcacagcttgccatcttaacaagacgctggaggcctgcagagatgaagttggac
cccttccaggagcttgtgttggaaagcaatagtgttgatgaactccgagagaagctaagt
gaaatcagtgggattcctttggaagacattgaatttgccaagggtagggggaccttcccc
tgtgatatttctgtccttgatattcatcaagatttggactggaatcctaaagtctctacc
ctgaatgtttggcctctttatatctgtgatgatggtgccgtcatattttatagggataaa
acagaagaagtaatggaattgacagatgagcaaagaaatgaattgatgaaaaaggaaagc
agccgactgcagaagacaggacatcgtgtgacatactcccctcgaaaagagaaagcactc
aagatctacctggatggggcgccaaataaagatgtggctcaagactga
DBGET
integrated database retrieval system
