Microlunatus phosphovorus: MLP_44840
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Entry
MLP_44840 CDS
T01535
Symbol
mfd
Name
(GenBank) transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mph
Microlunatus phosphovorus
Pathway
mph03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MLP_44840 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mph03400
]
MLP_44840 (mfd)
Enzymes [BR:
mph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MLP_44840 (mfd)
DNA repair and recombination proteins [BR:
mph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
MLP_44840 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
CarD_TRCF_RID
Helicase_C
ResIII
MFD_D3
UB2H
RecG_dom3_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAK37498
UniProt:
F5XTP9
LinkDB
All DBs
Position
complement(4784382..4787978)
Genome browser
AA seq
1198 aa
AA seq
DB search
MSLQGLVELFATDPTMAGAVGDARSRTLPALDLTAPPAMRSLIASALAAGVDHGGSGRPV
LLVTSTFREAENLAAACRSLVGEEEVAYYPAWETLPHERLSPQSDTVGRRLAVLRRLVGN
DELPPPRIIVAPVRSVLQPQVKGLGHMTPVRLTVGKDIDLDDLAKSLVDAAYIRVDMVER
RGEFAVRGGIVDIFPPTEEHPVRVDFFGDEVEEIRYFTVADQRSSDLTRTEIIASPCREL
LLTDEVRRRAFALSQAHPELIDMLDRIAQGHAVDGMEALSPVLVDGMELLIDVVPEDTHV
LICDPELVRGRAIDLVKTSEEFLQASWAAAAGGGQAPIDLGASSYQPLADVRAAAIDRGL
AWWTLSPFNAGPGAEEAGRQPIRTEDGEIIDFSTAVSIAGVESRTIAGHVQDSYRGEVET
AVAEIGRRLAEDWRVVLTAEGKGMTGRMAEVLTEHEYPVRVLDALPAQPEPGIATIVLAD
LQHGFVADRVKLALFTAADLSGQRAADKATRKMPARRKNQIDPLELQPGDPVVHNQHGVG
RYVEMVQRSVAGSVREYLVIEYAPSKRGQPGDRLYVPMDSLDQVTRYVGGEHPTLDKMGG
ADWAKRKSRARKAVREIAGELIKLYAARQASRGHAFSQDTTWQRELEDAFSYVETPDQLA
AVDEVKHDMEQIVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHYA
TFADRYAGFPVNVAPLSRFQTDAQAKATLEGVAEGKVDVVVGTHRLLSKEIQFKDLGLVI
IDEEQRFGVEHKEQLKKLRMDVDVLAMSATPIPRTLEMAITGIREMSTIATPPEERHPVL
TFAGPYEEGQLIAAIRRELLREGQVFYIHNRVQSIEKTAKRIAELVPEARVVTAHGQMGE
QRLEQVMVDFWERRADVLVCTTIVEAGLDISTANTLIVERADMLGLSQLHQLRGRVGRGR
ERGYAYFFYPPDKPLTETAHDRLATIAAHTDLGAGMAVAMKDLEIRGAGNLLGGEQSGHI
ADVGFDLYIRLVGEAVAEFRGQDTEPEPEVRIELPITAHLPEDYVPSERLRLEMYKRLAE
VRSDADIEAVREELADRYGALPSVVETLLQVAKFRLVARAAGLTDIVSQGNFIRFAPAEL
LESRQLRLKRLYPGAVVKDTAKLILVPRPRSKTIGGEPPKDGELLDWCTAVVTAIFAS
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgcaggggcttgtcgagctgttcgccaccgatccgaccatggcgggggcggtt
ggtgacgcacgttcgcgtaccctgcctgcgctcgatctgaccgcgccgccggcgatgagg
tcgctgatcgcgtcggctctcgcggctggtgtcgatcacggtggatccgggcgaccggtg
ctgctggtgacctccacgttccgggaggccgaaaacctggcggccgcctgccgcagtctg
gtgggggaggaggaggtcgcctactacccggcctgggagacgctgccacacgagcggttg
agcccgcagtccgacaccgtcggccggcggttggcggtgctgcgtcgcctggtcggcaat
gacgaactgccaccaccgaggatcatcgtggccccggtccgcagtgtgctgcagccacag
gtgaagggcctggggcatatgaccccggtccggctcacggtcggcaaggacatcgacctc
gacgatctcgccaagtcgctggtcgatgccgcgtacatccgggtggacatggtcgagcgg
cgcggtgagtttgccgtccgcggcggcatcgtcgacatcttcccgccgaccgaggagcat
ccggtcagggtcgacttcttcggtgacgaggtcgaggagatccgctatttcacggttgcc
gaccagcggtcctccgacctcacccggaccgagatcatcgcctcgccctgccgtgaactg
ctgctcaccgacgaggtacgccggcgcgctttcgccttgtcacaagcacatcccgagctc
atcgacatgctggaccggatcgcccaggggcatgcggtggatggcatggaggcgctgtcg
ccggtgctcgtcgacggcatggagctgctgatcgacgtcgtgcccgaagacacgcacgtg
ctgatctgcgatcccgagctggtccgcggtcgggccatcgatctcgtcaagaccagcgag
gagttcttgcaggcatcgtgggccgcggcagcgggcggtggacaggcacccatcgacctg
ggtgcatcgtcgtaccagccgttggccgatgtccgggccgccgcgatcgaccgcggtctg
gcctggtggaccctgtcgccgttcaacgccggaccaggcgccgaggaggcgggacggcag
ccgattcgcaccgaggacggcgagatcatcgacttctccaccgcggtctccatcgcgggc
gtcgagtcgaggaccatcgccggccacgtccaggacagctatcgcggcgaggtggagacc
gccgtcgccgagatcggtcggcggttggccgaggactggcgcgtggtgctgaccgccgag
ggcaagggcatgaccggccggatggccgaggtgctgactgagcacgaatatcccgtacgc
gtcctggacgcccttccagcccaacccgaacccggcatcgccaccatcgtcctcgccgat
ctgcagcacggcttcgtcgccgaccgcgtcaagctggcactgttcaccgcggcggacctg
tccgggcaacgtgccgctgacaaggccacccgcaagatgccggcccgacgcaagaaccag
atcgacccgctggaactgcagcccggcgacccggtcgtgcacaaccagcacggcgtcggt
cgctacgtcgagatggtgcagcgcagtgtggccggttcggtccgggaatacctggtgatc
gagtacgcgccctccaaacggggccagcccggcgaccggctctacgtgccgatggactcc
ctcgaccaggtgacccgctatgtcggtggcgaacacccgaccctggacaagatgggtggt
gccgactgggccaagcggaagagccgggcgcgcaaggcggtccgggagatcgccggtgag
ctgatcaagctgtatgccgcccggcaggcttcccgtgggcacgccttttcgcaggacacc
acctggcagcgcgagctggaggatgccttctcgtacgtggagacccccgaccagctggct
gcggtcgacgaggtcaaacacgacatggagcagatcgtgccgatggaccggctgatctgc
ggcgacgtcggctatggcaagaccgagatcgcggtccgggccgcgttcaaggcggtgcag
gacggcaagcaggtggcggtgctggtgccgaccaccctgctggtgcagcagcactatgcg
acgtttgccgaccgctatgccggcttcccggtcaacgtcgcgccgctcagccggttccag
accgacgcgcaggccaaggccaccctggaaggggtggccgagggcaaggtggacgtggtc
gtcggcacccatcggttgctcagcaaggagatccagttcaaagacctgggtctggtgatc
atcgacgaggaacagcgattcggtgtcgagcacaaggagcagctgaagaagctgcggatg
gacgtcgacgtgctggccatgtcggcgacgccgatcccgcgcaccttggagatggcaatc
accggcatccgggagatgagcaccatcgccaccccgccggaagagcggcatccggtgctc
accttcgccgggccgtacgaggagggtcagctgatcgccgccattcgccgcgagctgctg
cgcgaaggccaggtgttctacattcacaaccgggtgcagagcatcgagaagaccgccaag
cggattgccgagctggtgcccgaggcccgggtcgtgaccgcccacggtcagatgggggag
cagcggctggagcaggtgatggtcgacttctgggaacgacgggccgacgtgctggtctgc
accacgatcgtcgaggcggggctggacatctccaccgccaacaccttgatcgtcgagcgc
gccgacatgctcggtctgtcccagctgcatcagctccgtggccgggtcggtcgcgggcgc
gagcgcggctacgcatatttcttctatccccccgacaagccgctcaccgagaccgcgcac
gaccggctcgcgaccatcgccgcccacaccgatctgggtgcgggcatggcggtggcgatg
aaggacctggagatccgcggcgccggcaatctgctcggtggtgagcagtccgggcacatc
gccgacgtcggcttcgacctctatatccggctggtcggcgaggccgttgcggagttccgc
ggccaggacaccgagcccgagccggaggtccggatcgaactgccgatcaccgcccatctg
cccgaggactacgtaccgtcggagcggctgcgactggagatgtacaagcggctggccgag
gtgcgctccgatgcggacatcgaggcggtccgagaagagctggcggatcgctacggggcg
ttgccgtcggtggtggagacgctgctgcaggtcgccaagttccggctggtggctcgggct
gcgggtctcaccgacatcgtcagccaaggcaacttcatccggttcgcgccggcggagctg
ctggagtcgcggcagctgcggttgaaacggctctatccgggggcggtcgtcaaggacacc
gccaagctgatcctggtgccgcgtcctcgatcgaagaccatcggcggcgagccgccgaag
gacggcgagctcctggactggtgcacggccgtggtcaccgcgatcttcgccagctga
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