Monomorium pharaonis (pharaoh ant): 105836031
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Entry
105836031 CDS
T05760
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013
Nucleocytoplasmic transport
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105836031
09122 Translation
03013 Nucleocytoplasmic transport
105836031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105836031
03041 Spliceosome [BR:
mpha03041
]
105836031
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105836031
Spliceosome [BR:
mpha03041
]
Complex C
Other components
EJC/TREX
105836031
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105836031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
105836031
NCBI-ProteinID:
XP_012535240
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAMFEALRKDYSDYLQQHFKLSDVSLFQKKCVERCANDSDRKPAIDQALRDTLLVVLTEN
ASGNVRSLETYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVTVWK
EELFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGLEKAEEDDLEQITKDDDKLESKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKV
FSAHASNVLSAFASFKLEEQRSYPTTCMKMDTSTEGSHKETHYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKSFLASGYETSETHELKPDQVEWVKTTTEQVYTLLT
ETPPNGPAFAETVKNILKREEHWNAWKNEGCPPFKRPASEASGGDEEPRKLRRPRRRIGD
MIRDAQAFGKYHMGNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMV
DDKYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDT
KLETEETPPSESTDQEFNEDVLKQESEQVDAESADMKARKLNKVTSEMVAKLSESLKNDW
KKLATKFGYTNDEIAFFQSKATPYEQCKTMLEIWAEEDEDASVENLAYILEGLKYTEALA
ILKS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtttgaggcgttgagaaaggactacagcgattatttgcagcagcatttcaag
ctgtcggatgtttcgttgtttcaaaagaagtgtgtcgaacgttgtgcgaatgatagcgac
agaaaaccggcgatcgatcaggcgctccgagatactctgctagttgtactaacggaaaac
gcttcgggtaacgtgcgctccctcgaaacatacatcaccttctgcatagagctatgcagg
aaggatcttgcgacagcgagcatgccagtaatgttgctgggcgacatcttcgattcgatg
acgctagacagatgcgagcaattgttcaccttcgtggagaacaatgttactgtgtggaaa
gaggagctatttttcactgcctgtaaaaataatttgttgagaatgtgtaacgacctactg
aggcgactatcgcgttcgcaacaaactgtgttttgtggtagaattctgctattccttgca
aagttctttcccttctctgagaggtctggtttgaacattgtcagtgagttcaatctggaa
aatcatacggaattcggcttggagaaagcagaggaagatgatttagaacagataactaag
gacgacgacaagttggagagcaagataccaatcgattataatttgtatagaaagttctgg
gctctacaagactttttcagaaatccaaatcaatgttataataaaatgcactggaaggtc
ttttcagctcatgcatctaatgtgctgtcagcatttgcttcctttaaattggaggaacaa
cgcagttatcccacaacatgcatgaagatggacacttctacagaaggttcccacaaggaa
acacactattttgcgaaatatttgacgaatcagaaactattggaattgcagctgtcggac
tctaatttcagacgatatgtattgctgcaatttctcattcttttccagtatctgaatagc
actgtgaagttcaagtccttccttgccagtggctatgagacaagtgagacacatgagctc
aaaccggaccaagtggaatgggtgaagaccaccactgaacaagtttacactctactgaca
gaaacaccacccaatggtcccgcattcgcggagacggtgaagaatattttaaaacgcgag
gagcattggaatgcttggaagaacgagggttgcccgccgtttaaacgaccggcatcagag
gccagcggtggtgatgaagagccgcgaaaactgaggagaccaaggcgacgtatcggtgat
atgattagagatgcacaagcgtttggcaaatatcatatgggcaatccagaactaacaaaa
ttatggaatctctgtccaaataatctggaagcatgtaaatctaaggatagagattttctc
ccatcattagaaacgtattttgaagacgctataatggaactagatcctgctgcaatggtc
gatgataaatacaagaaagtgaacgatggtaactttggatggagagcgttaaggctgttg
gcaagacgaagtccgcatttctttgttcacggcaattatcccataaataaattgcctgaa
tatcttgagacaatgataaaaaaaattgccaaggatcgtcctcagacacaatcggatacg
aaattggaaaccgaggagacaccaccatcggaatcgaccgatcaagaattcaacgaggat
gtcttgaaacaggaaagtgaacaggtagatgccgaaagtgctgacatgaaagctagaaaa
ctgaacaaagttacatcggaaatggtggcaaaattatctgagagcctaaaaaacgattgg
aaaaaattagcaacaaaatttggttatacaaatgatgagattgcttttttccaaagcaaa
gcaactccatatgagcaatgtaagactatgcttgagatatgggcggaagaggacgaggat
gcatcggtcgagaatttagcttatattttagaaggtttaaaatatacggaggcattagcg
atattaaaatcctaa
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