Mycoplasma phocoeninasale: HGG64_01370
Help
Entry
HGG64_01370 CDS
T08146
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mphn
Mycoplasma phocoeninasale
Pathway
mphn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mphn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HGG64_01370 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphn03400
]
HGG64_01370 (uvrB)
DNA repair and recombination proteins [BR:
mphn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HGG64_01370 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HGG64_01370 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
AAA
UVR
Kinesin
AAA_7
AAA_22
AAA_16
DEAD_2
nSTAND3
UB2H
Myb_DNA-bind_7
AAA_30
Microtub_bd
Viral_helicase1
DUF87
Motif
Other DBs
NCBI-ProteinID:
QJG66358
UniProt:
A0A858U6E9
LinkDB
All DBs
Position
complement(309550..311520)
Genome browser
AA seq
656 aa
AA seq
DB search
MNNLKLTSKYQPAGDQIEAIKQLVEGLEENKHHQILLGVTGSGKTFTIANVINQVNRPAL
IISHNKTLASQLYSELKELFPENRVEYFVSYFDYYKPEAYLPKSDLYIEKTSKNNKELEA
MRMSAINALSIRHDTIVVASVASIYGEFNPVEYRKNFLPIENNLKISRKELLIKLIQMGY
ERNQGELSRGQFYTKGDVIEICPGYSSDYNIRIEMFGDEIENISLIDSLTKSLIKSQQSL
TIFPATTYTVNPNNIESICEAIKIELEDQIEYFKNENKLLEAQRLKDRTLNDIDSIKEFG
YVNGMENYARYVDGRSAGERPYTLFDYLPQDAIIFIDESHLMIPQINGMYNGDRSRKETL
VKYGFRLPSALDNRPLKFFEYENFNFPRIYMSATPGEYELDRTEGEVITQYIRPTGLLDP
IIEIKPKKNQIIELYDLIQEQINKKEKTLILTTTKKNAEELSLYFQEHKIKCAYIHDRFK
IFERNEILRGLRIGKFDVVIGINLLREGIDLPEVSLVCILNADSAGLMRDARSLIQIVGR
AARNVNGKVIFFADEITSSMKAAIEDNKHKREIQSKYNQEHNITPQTIIKAIPKSEHDDE
IFDKLLNEKDYTKMIHNKKFINSMIYKMKDLAKNKKFEEAIKVRDYLIELGVDLEQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcttaaactgacatcaaaataccagccagccggagaccaaattgaggcaata
aagcaactagtagaaggtttagaagaaaataaacaccatcaaattttacttggagtaaca
ggatctggtaagacatttaccatcgcaaatgtaattaatcaggtcaatcgaccagcttta
ataattagtcataacaaaaccttggcaagtcaactatacagtgaattaaaagaacttttt
ccagaaaacagagttgaatactttgtttcctattttgattattataaacctgaagcatat
ttaccaaagtcagatctatacattgaaaagacaagtaaaaataataaagaattggaagcg
atgaggatgtcagcgatcaatgcattaagcattcgtcatgacacaattgttgttgcttca
gttgcatcaatttatggtgaatttaacccagtagaataccgaaaaaattttctaccgatt
gaaaacaatttaaaaattagtcgtaaagaactattgatcaaattaatccaaatgggatat
gagcgcaatcaaggcgaattaagtcgtggacagttttatacaaaaggtgatgtcatcgaa
atatgtccgggttatagttcagattataatattcgcattgagatgtttggcgatgaaatt
gaaaacatctctttaattgattcattgaccaaaagtttaattaaatcacaacagtcactt
acaatctttccggccaccacctatacagtgaatcctaataatattgagagtatttgtgaa
gcaatcaaaattgagctagaagatcaaattgaatattttaaaaatgaaaataaattacta
gaagcacaaagacttaaggatagaacattgaatgatattgattcaattaaagagtttggc
tatgtaaacggaatggaaaactatgctcgctatgttgacggaaggtcggctggtgaacgt
ccctatacattgtttgattatctaccacaagatgcaattatttttatcgatgaaagtcat
ctaatgattccacaaataaatggaatgtataatggtgatcggtcacgtaaggaaacttta
gttaaatatggatttagattgccatcagctttagataaccgtccattaaagttctttgag
tatgaaaattttaactttccaagaatttatatgtctgcaacaccaggcgagtatgaactt
gacagaactgaaggtgaggttataactcaatatattcgcccaaccggattgttagatcca
attattgaaatcaaaccaaagaaaaatcaaattatcgaactttatgatttaatccaggag
caaattaataaaaaagagaaaacattaattttaactacaactaagaagaatgctgaggag
ctttcactttactttcaagagcataaaataaagtgtgcttatattcatgaccgttttaag
atttttgagagaaatgagattctaagaggattaagaattggaaaatttgacgtagtaatt
ggaattaatctgctacgtgaaggtattgatttaccagaagttagtttagtgtgtattcta
aatgccgatagtgctggattaatgcgtgatgctcgaagtttaattcaaattgttggccgg
gcagcacgaaatgttaatggtaaagttatcttttttgctgatgaaattacgagtagtatg
aaagcggcaattgaggataataaacataagcgagaaatccaaagcaaatacaatcaggaa
cacaacattactccacaaactattattaaagctattcctaaatcggagcatgatgacgaa
atttttgataagttgctaaatgaaaaagactacacgaaaatgattcacaataaaaaattt
atcaattcaatgatatacaaaatgaaagatttagcaaagaataaaaaatttgaggaagca
ataaaagttcgtgattatttaattgagcttggagttgaccttgaacagtag
DBGET
integrated database retrieval system
