Methylophaga pinxianii: LGT42_012910
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Entry
LGT42_012910 CDS
T08312
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin00521
Streptomycin biosynthesis
mpin00523
Polyketide sugar unit biosynthesis
mpin00541
O-Antigen nucleotide sugar biosynthesis
mpin01100
Metabolic pathways
mpin01110
Biosynthesis of secondary metabolites
mpin01250
Biosynthesis of nucleotide sugars
Module
mpin_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LGT42_012910 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LGT42_012910 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LGT42_012910 (rfbC)
Enzymes [BR:
mpin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LGT42_012910 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UPH45402
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Position
complement(2693429..2693974)
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AA seq
181 aa
AA seq
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MLVTETSIPDVKLLTPKKFGDERGFFLESYNKKTFEDLLGLDIEFVQDNHSRSAKGVLRG
LHYQIKQPQGKLVRVTAGKVFDVAVDMRRDSPTFGHWTGAILTAEGQEQFWVPAGFAHGF
LVLSDSADFLYKTTDYYAPEYERTVAWDDAALAIDWHLDGITPVLSAKDQQGTPFKLAET
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcaccgaaaccagtattcccgatgttaaattactgacgcccaaaaagtttggc
gatgaacgtggtttttttctggaaagttataacaagaaaacctttgaggatttgctgggg
ctggatattgagtttgtgcaggataatcattctcgctcagccaaaggcgtattgcgcggg
ttgcattatcagatcaaacaaccacaaggcaaactggtccgtgtcaccgccggcaaagtc
tttgatgttgccgtagacatgcgtcgtgattcaccaacgtttgggcattggacgggcgct
attttaacggctgaaggccaggaacagttttgggttccggcaggatttgcacatggtttt
ctggtgttgagtgacagtgctgattttctctataaaacgacagattattacgccccggaa
tatgagcgaacggtagcctgggatgatgctgctctagctatagattggcatttagatggg
ataactccggttttatctgccaaggatcagcaaggtacgccgtttaaattggcagagacg
ttttaa
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