Methanosphaerula palustris: Mpal_2068
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Entry
Mpal_2068 CDS
T00823
Name
(GenBank) Carbohydrate binding family 6
Organism
mpl
Methanosphaerula palustris
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Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
CBM_6
CBM_35_2
InlK_D3
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
ACL17367
UniProt:
B8GDL6
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Position
complement(2188162..2192232)
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AA seq
1356 aa
AA seq
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MQIEAFIGSSPNFQYTNTKSDLVLMIVTTEKMRWVLLMIVLVAICCTPVSASSLFVGVAP
ASTPVPSTNSNLVSELSVSGYSAQYQQNVSWPSENFLLKGLAEDAPNGTLFVTDRSTTSV
TILNATTMAVQGSPIPLSGISIDYPLNSVYDPEHSRLYIYDNGNQDLVGFAWDSTNQTLN
YDGMTIVLPERCSGLALDSVANILYVLPEDPDPDIGSIHRYSTVTGASLDDISLGVWGLS
QISSLAVDSENHCLYMKAYYSLLDSECMFSWNTSTSNFNTGIASVSDSDTIMALAVDPAS
HYLIAATKSQNLGNNLYYPMIEFYDRSMNQMDSALACPSDFPGVSRRGNLPDDYYLAVLP
ETLAPPVANFTADVTNGTAPLEVEFTDQSTGSPDSWHWEFGDGTTSTDLGFADHTYTEAG
NYTVNLTVANPGGSNSTTKTNYITVHAPIFAPVVNFTANVTNGTSPLTVGFTDLSTNSPT
DWLWEFGDGTTSTMQNPVHTFTDIGNYTVNLTAANTGGNNTSIRTDYITVTQVPVPVANF
SANVTNGTSPLSVGFTDLSTNSPTDWHWDFGDGTTSTMQNPVHTFSDIGTYTVNLTATNA
GGNATQTKTDYITVTQVPVPVANFSANVTNGTSPLSVGFTDLSTNSPTSWLWDFGDGTTS
TMQNPVHAYMAAGNYSVNLTATNAGGNASQNKTDYITVHAPVFAPVANFTANVTNGTAPL
SVGFTDLSIGSPATRSWNFGDDNTSTEQNPVHTYTAAGNYTVNLTVTNAGGSNTSVKTNY
ITVHAVVPPTTAPTTTVPTTAPTTPPTTVPTTVPTRIPTTIPTTIPVTPTPTATVPPLVA
NFSANVTTGQTPLAVQFTDATSGSVQQYFWQFGDGGASFDKNPVHTYSAAGTYTVSLVAI
GSTGADVKTIPQYITITTPGTPTVSPTATAPTQTVTTTVTATTPAPTTTTTVTPTVTLTT
ATTTVTPLPTSSGHDLPLANFVVTYQAGSGSMGIQVTDASTNATTLKYDLGDGTTTAYKN
FKYTYWQPGTYTITLIATNDAGSSTKTVAVTVPAGSPTITTIVPTVTTPAPTMTVSPTTT
VTLPVTPTVTSTVTPTPTPTNPNLPVANFTVTFPGGPGSMGIQVINTAVNATSVHYNLGD
GATTAYPNFTYTYWQPGTYTINQTATNAAGSTNKTLVVTIPAVLTPTTTTTPAPTTISPT
VTVTGSAYNGPHTIPGTLQAEDYDLGGEGVAYHDTTAGNEGGVYRHDDVDIEQLDTDGSP
NVGWIRSGEWLGYTVNVSTAGTYTAGFRVASSHSGSSIQVYVDDGTTPVATVSVPNTGDW
PAFRTVSVPVTLPAGQHRLRLAFPTDYVNINWISFA
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgaagcgtttattggttcttcccccaattttcaatataccaatacaaaatcc
gatctggttttaatgattgttacaacggaaaaaatgagatgggtgctgctgatgatcgtg
ctggtcgcgatctgctgcaccccggtatctgcatcgtcgctgttcgttggagtcgctccc
gcctcaacaccggttccgtcgacaaactccaacctggtgagtgaactctctgtgtccggt
tattctgcccagtaccagcaaaatgtctcctggccttccgaaaatttcctcctcaagggg
ctggctgaggacgcccccaacgggacgctcttcgtcacggataggtcgactacgtccgtc
acaatcctcaatgcaacgacgatggcagtgcagggatcgccgatcccgctttcaggtata
agtatagactatcccctgaatagtgtgtacgatcccgagcatagccgcctgtatatctat
gataatggaaatcaagatctggtcgggtttgcatgggattcaactaatcaaacgctgaac
tacgacgggatgacgattgtccttcccgaacgttgttccggactggctctggattcggtc
gctaatattctctatgtattgccagaagatcctgatccggatatcggctcgatccatcga
tatagtacggtgacgggagcgtctctggatgatatctctctcggagtatgggggctcagt
cagatctcctcacttgccgtcgacagtgagaaccactgtctctatatgaaagcatattat
tccctccttgattccgaatgcatgttcagctggaatacctccacttccaatttcaacacc
gggattgcttcggtttcggatagtgataccataatggcactggccgtggatcctgcctct
cattacctcattgcagcgacaaaatctcagaatttgggtaataatctgtattatccaatg
attgaattttatgaccgttccatgaaccagatggactctgccttggcctgcccgtcggat
ttccccggcgtctcaaggagagggaatctgccggacgactattatctggccgtcctccct
gaaacattagccccgcctgtggcgaacttcacggcagacgtgacgaacggcaccgctccg
ctcgaggtcgagttcaccgatcagtcgaccggttccccggattcgtggcactgggagttt
ggtgacggcactacctcgaccgatttagggttcgcagaccatacctacacggaagccggg
aactacacggtgaatctgacggtggcgaaccccggcgggagcaactccacgacaaagacc
aactacatcacggtccatgccccgatatttgccccggttgtgaacttcacggcgaacgta
acgaacggcacgtctccgctgaccgtcggtttcactgacctttcgaccaattccccaacg
gattggctctgggagtttggtgacggtaccacctctacgatgcagaacccggtccacacc
tttacggatatcgggaactacacggtgaacctgacggcggccaatactggtgggaacaac
acctcgatcaggaccgactatatcacggtcacccaggtacccgttccagtggccaacttc
tcggcgaacgttacgaatgggacatccccactgtcggttggtttcactgacctttcgacc
aattctccaacggattggcactgggacttcggtgacggcaccacctctacgatgcaaaac
ccggtccacaccttttcggatatcgggacctacaccgtcaacctgacggcgacgaacgcc
ggggggaatgccacccagaccaagacggattatatcacggtcacccaggtgcccgttcca
gtggccaacttctcggcgaacgttacgaatgggacatccccgctatcggtcggtttcact
gacctttcgaccaattctccaacctcctggctgtgggactttggtgatggcaccacctct
acgatgcaaaacccggtccatgcctacatggcggccggtaactattcagtgaacctgacg
gcgacgaacgccggggggaatgcctcccagaacaagacggactatatcacggtccatgcc
ccggtgtttgccccggttgcgaacttcacggcgaacgtgacgaacggcaccgcaccgctc
tcagtcggtttcactgacctgtcgataggttccccggcgaccaggtcgtggaacttcggt
gacgacaatacctcgaccgagcagaacccggtccacacctatacggcggcagggaactac
acggtgaacctgacggtgacgaacgccggcggttccaacacctcggtaaagacgaactac
atcaccgtccatgccgtggtgccaccgaccaccgcaccaacgacaactgttccgacgacg
gcaccgaccacaccaccaacaacagtaccaacgactgtgccgacgaggattccgacgacg
attcccacgacgataccggtgaccccgacgccaaccgcgacggtgccgccgcttgtagcg
aatttcagcgcgaatgtgacgaccggccagactccgctcgccgtgcaattcactgatgcg
acctctggttctgtccaacagtacttctggcagttcggcgacggcggggcatcgttcgat
aagaacccggtccacacctactcggcagccggcacctacactgtctccctcgtcgccatc
ggttctaccggggctgatgtgaagacgatcccacagtacatcaccatcaccacaccggga
acaccgaccgtctcaccgactgcgacggcgccgacccaaaccgtaacgacaacggtgaca
gcgacaacgccagctccaaccactacaacaaccgtcaccccaaccgtgacgttgacgacc
gcaacgacgaccgtgaccccgctgccgacctcgtccgggcatgacctgccgctcgcgaac
ttcgtggtcacctaccaggccggctcgggctcgatgggcatccaggtcaccgacgcctcg
acgaacgccaccaccttgaagtacgacctcggcgacggtacgactaccgcctataagaac
ttcaagtatacctactggcagcccggcacctatacgatcaccctgatcgcaaccaacgac
gccgggtcttcgacgaagaccgtcgcggtgacggtgccggccggttcgccgacgatcacg
accattgtaccaaccgtgacaacgccggctccaacgatgactgtctcgccgacaacgacg
gtgaccttaccagttacgccgaccgtgacgtcgaccgtaaccccgacaccaacaccaacc
aatccgaatctgccggtggcgaacttcacggtcaccttcccgggcggcccgggttcgatg
ggcattcaggtcatcaacactgcggtgaacgcgacttcagtccattataacctcggcgac
ggggcgaccaccgcctatccgaacttcacctacacctactggcaacccggcacctacacg
atcaaccagaccgcgacgaacgcggccgggtctaccaacaaaactctggtcgtgaccata
cccgcggtactgactccgaccacgacaacaaccccggccccaaccacgatctcaccgacg
gtgaccgtcaccggttcagcctacaacggcccgcacacgatcccaggaacattgcaggcc
gaggattacgacctcggcggtgagggtgtcgcctaccacgacaccactgccggcaatgaa
ggtggcgtctaccggcacgacgacgtcgatatcgaacagctcgacaccgacgggtcgccg
aacgtcggctggatccgttccggcgagtggcttgggtacaccgtgaacgtcagcacggcc
ggcacctacacggccgggttccgtgttgcttcctcccactccggttcatcgatccaggtc
tatgtcgacgacggtacgaccccggtcgcgacagtgagcgtcccgaacaccggtgactgg
cccgccttccggaccgtctcggtgccggtgaccctgccggcagggcagcaccggctgaga
cttgcgttcccgaccgactacgtcaacatcaactggatcagtttcgcctga
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