Pseudoduganella plicata: E1742_08635
Help
Entry
E1742_08635 CDS
T06563
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
mpli
Pseudoduganella plicata
Pathway
mpli01501
beta-Lactam resistance
mpli01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E1742_08635
01503 Cationic antimicrobial peptide (CAMP) resistance
E1742_08635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpli02000
]
E1742_08635
01504 Antimicrobial resistance genes [BR:
mpli01504
]
E1742_08635
Transporters [BR:
mpli02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E1742_08635
Antimicrobial resistance genes [BR:
mpli01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E1742_08635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QBQ36211
LinkDB
All DBs
Position
complement(1960928..1964080)
Genome browser
AA seq
1050 aa
AA seq
DB search
MARFFIDRPIFAWVVAIVIMLAGVLAIKTLPIAQYPSIAPPSISIAGSYPGASAKTVEDA
VTQVIEQKMKGIDGLRYMSSSSDSTGGISITLTFRSGTNPDIAQVQVQNKLQLATPLLPT
AVTQQGLVVSKATKNFLMVLGFVSEDGSMNNADLGDYVAANVVDPLSRVAGVGDVTLFGS
QYAMRIWLDPTKLQSYQLTPADVMTAVQAQNAEVSAGELGGAPAIPGQQLNATVTAQSRL
QTAEQFGAILLKTMESGATVHLRDVAKMELGRENYNTVARFNGKPAAGIAIKLATGANAL
DTAEAVKQRVEEMGRLFPKGMKAVVAFDTTPFVELSIEEVVKTLGEAIVLVFLVMYLFLQ
NFRATLIPTMAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
TDEGLSPKEATKKSMGQISGALVGIALVLSAVFVPMAFFGGSTGVIYRQFSITIVSAMAL
SVLVAMVFTPALCATFLKPVEKGHHMTDRGFFGWFNRKFEAGTNKYQGWVASMIRRTGRS
MIVYAVILAALAFVFMRLPTSFLPEEDQGVLFSQIQLPTGATQERTLKTIEKVEQHFLQD
EKANVASVFAVAGFSFGGNGQNTGIAFVKLKDWSERGGKENRVGSIVGRAMGSFSQLRDA
MVFAFAPPAVLELGNASGFDLQLQDQGGVGHEALMAARNQLLGMASQNKALVGVRPNGQE
DTPQYKITVDQQKATALGLTVADVNRVLSVGWGSAYVNDFIDRGRVKKVFMQGQADARMV
PEDLNKWFVRNGAGDMVPFSAFAHGEWKYASPRLERYNGLSSVNVQGSPAPGVSSGVAMA
EVEKMMAQLPAGIGYEWTGLSVEERESGSQTTQLYSISILIVFLCLAALYESWSVPVSVL
LVIPLGILGTVIATWGFHLSNDVYFQVGLLTVVGLSAKNAILIVEFAKELQEAGRDLREA
TLEAVKLRLRPILMTSIAFGLGVLPLAVASGAGSGSQNAIGVGVLGGMLTATFLGIFFVP
VFFVLVRSWFASRTAKANGGTDAIVVKEAH
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatttttcatcgaccgcccgatcttcgcttgggtggtcgcgatcgtgatcatg
ctcgccggtgtcctggcgatcaagacactcccgatcgcacagtacccgagcatcgccccg
ccatcgatttcgatcgcgggttcgtaccctggcgcctcggccaagaccgttgaagacgcc
gtcacgcaggtgatcgaacagaagatgaagggtatcgacggcctgcgctacatgtcgtcg
tcgtccgattccaccggtggcatcagcatcacgctgacgttcaggagcggcaccaatccc
gacatcgcccaggtacaggtgcagaacaagctgcagctggccacgccgctgctgccgacc
gctgtcacgcagcagggtctcgtcgtctcgaaagccaccaagaacttcctgatggtgctg
ggcttcgtctccgaggacggcagcatgaacaacgccgacctgggcgactacgtggccgcc
aatgttgtcgacccgctgtcgcgcgtggccggcgtcggcgacgtcacgctgttcggctcc
cagtatgcgatgcgcatctggctggatccgaccaagctgcaaagctaccagctgacgccg
gcggacgtgatgacggccgtgcaggcgcagaatgccgaggtctcggccggtgaactgggc
ggcgcgcccgccatcccgggccagcagctgaacgccaccgtgacggcacaaagccgtctg
cagacggccgagcagttcggcgcgatcctgctgaagacgatggaaagcggcgccaccgtg
cacctgcgcgacgtggcgaagatggaactgggccgcgagaactacaacacggtcgcccgc
ttcaacggcaagcccgccgccggtatcgccatcaagctggccaccggcgccaacgcgctc
gataccgccgaagcggtcaagcagcgcgtcgaagagatgggcaggctgttcccgaaaggg
atgaaggccgtcgtcgcgttcgatacgacgccgttcgtcgagctgtccatcgaggaagtc
gtcaagacgctgggcgaagccatcgtgctcgtgttcctcgtcatgtacctgttcctgcag
aacttccgcgccaccctgatcccgacgatggccgtgccggtcgtcctgctgggtaccttc
gccatcctgtccgcgttcggctactcgatcaatacgctgacgatgttcgcgatggtcctg
gcgatcggcctgctggtcgacgatgcgatcgtcgtcgttgaaaacgtcgagcgcgtcatg
acggacgagggcctgtcgccgaaagaggcaacgaaaaaatcgatgggccagatctccggc
gccctggtgggtatcgcgctggtgctgtccgccgtgttcgtgccgatggcgttcttcggt
ggctccacgggcgtcatctaccggcagttctccatcacgatcgtttcggcgatggcgctg
tccgtgctggtggcaatggtcttcacgccggcgctgtgcgccacgttcctgaaacctgtc
gagaaaggtcaccacatgaccgatcgcggcttcttcggctggttcaaccgcaagttcgag
gcgggtaccaacaagtaccagggctgggtggccagcatgatccgccgcaccggccgttcg
atgatcgtctatgccgtcatcctggccgcactggcattcgtgttcatgcgcctgccgact
tccttcctgcccgaagaggaccagggcgtgctgttctcgcagatccagctgccgacaggc
gccacgcaggagcgcacgctgaaaaccatcgagaaggtggaacagcacttcctgcaggac
gagaaggccaacgtggcttccgtgtttgccgtcgccggcttctcgttcggcggcaatggc
cagaacaccggtatcgcgttcgtcaagctgaaggactggtccgaacgcggtggcaaggaa
aaccgcgtcggctcgatcgtcggccgcgccatgggttcgttctcgcagctgcgcgatgcg
atggtgtttgcctttgccccgccagccgtgctggaactgggtaacgcatccggcttcgac
ctgcagctgcaggaccagggtggcgtgggccacgaggcgctgatggcggcccgtaaccag
ctgctcggcatggcctcgcagaacaaggcgctggtgggcgtgcgcccgaacggccaggaa
gatacgccgcagtacaagatcaccgtggaccagcagaaggcgactgcgctgggcctgacg
gtggcggacgtcaaccgcgtgctgtcggtcggctggggctcggcgtacgtcaacgacttc
atcgaccgcggtcgcgtgaagaaggtgttcatgcagggccaggccgatgcgcgcatggtg
ccggaagacctgaacaagtggttcgtgcgcaatggcgccggcgacatggtgccgttctcc
gcgttcgcgcatggcgagtggaagtatgcatcgccgcgccttgagcgttacaacggcctc
tcgtccgtgaacgtgcagggcagtcccgctccgggcgtatcgtcgggcgtggcgatggcc
gaagtcgagaagatgatggcgcaactgccggccggcatcggctacgagtggaccggcctg
tcggtggaagaacgcgagtccggctcgcagaccacgcagctgtactcgatctcgatcctg
atcgtgttcctgtgcctggccgcgctgtatgaaagctggtcggtgccggtttcggtgctg
ctggtgatcccgctgggtatcctgggtaccgtcatcgccacctggggcttccacctgtcg
aacgacgtctacttccaggtgggcctgctgacggtggtcggcctgtcggcgaagaacgcg
attctgatcgtggaattcgccaaggagctgcaggaagcaggccgcgacctgcgcgaggcg
acgctggaggcggtcaagctgcgcctgcgtccgatcctgatgacgtcgatcgctttcggc
ctgggcgtgctgccgctggccgtggcaagcggcgccggttccggttcgcagaacgccatc
ggcgtgggcgtgctgggcgggatgctgacggcgacgttcctcggcatcttcttcgtgccc
gtgttcttcgtgctggtgcgcagctggttcgccagccgcaccgcgaaggccaacggtggc
acggatgcaatcgttgttaaggaagcacactga
DBGET
integrated database retrieval system
