Marinomonas pontica: MACH16_16690
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Entry
MACH16_16690 CDS
T09751
Symbol
rluC
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpon03009
]
MACH16_16690 (rluC)
Enzymes [BR:
mpon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
MACH16_16690 (rluC)
Ribosome biogenesis [BR:
mpon03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MACH16_16690 (rluC)
BRITE hierarchy
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Motif
Other DBs
NCBI-ProteinID:
BDX02921
LinkDB
All DBs
Position
complement(1812830..1813801)
Genome browser
AA seq
323 aa
AA seq
DB search
MSDSELNSAERPAVRYVTIDENNTGQRIDNFLVTFLKGVPKGKIYNLLRKGEIRVNKKRT
KPDYRLQNEDVVRIAPIVIAPESDKPVLSDRLKSEIESRIVYEDKGLIVVNKPSGLAVHG
GSGLSFGLVEVIRQMRPLEKFIELVHRLDRDTSGLIMIAKKRAVLKELHTALREKEGVQK
TYLALVYGSWPKRKLQVNAPLLKNELQSGERIVRVHTDGKESLTRFKLVRQFEGYSLVEC
EPVTGRTHQIRVHTLHAGYPIVGDEKYSPAESLKETKALGFKRLCLHATRLDIMLNGERM
LFEAPLDKEWQSLMNEKLTGIFA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagaactaaattcagcagagcgtccagcggttcgttacgtcactattgac
gagaataatacgggtcagcgaattgataattttttggtcacctttcttaaaggggttccg
aaaggcaagatttacaacttattaagaaaaggggagattcgtgttaacaagaagcgaacc
aaaccggattatcgtcttcaaaatgaagatgttgtgcgtattgcgcctattgtaattgcg
ccagaatcggataaacccgtgttgtcagatagacttaagagcgagatagaatcacgcatc
gtctatgaggataaagggttaatcgtggttaataagccttctgggttagcggttcatggc
ggcagcggtctaagttttggtttggtggaagtcattcgccaaatgcgaccgttagagaag
ttcattgagcttgttcatcgattggatcgtgatacttctggtctgattatgatagccaag
aagcgtgcggttctaaaagagttgcataccgcattgcgtgaaaaagagggtgtgcaaaaa
acgtatcttgctttggtttacggcagttggccaaagcgaaagttgcaggttaatgctcct
ttgctaaaaaacgaactgcaatccggtgagcgtattgtcagggttcacacggatggaaag
gaaagtttgactcggtttaagttggtgcgacagtttgaaggctatagtttggtcgaatgt
gagccggtaaccggtcgaacacatcagatccgtgttcatactctgcatgctggctatcca
attgtaggtgatgagaagtattcgcctgcagagtcattaaaagagaccaaagcgcttggc
tttaaacgtttgtgtctgcacgccacccgtcttgatatcatgttgaatggtgagcgaatg
ttgttcgaagcgccgttagataaagagtggcaatccttaatgaatgagaaattaacaggc
atttttgcttga
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