Marinomonas pontica: MACH16_17780
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Entry
MACH16_17780 CDS
T09751
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_17780
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
MACH16_17780
BRITE hierarchy
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
DZR
zinc_ribbon_2
SLFN-g3_helicase
AAA_22
HPS6_C
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
BDX03030
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Position
1942210..1943970
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AA seq
586 aa
AA seq
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MTPAFQLRDYQVHAVEASLTHFRNSNDPAVIVLPTGAGKSLVIAELSRLAKGRVICLAHV
KELVEQNHAKFLATGASAGIYSAGLKQKSSTEKTTFASIQSLSANLEDFNEPASLIIIDE
CHRVGMEDGGQYNKTIEHFRALNPTVKILGLTATPYRLGSGWIYQTHYHGYARHCTHSLF
KKCIFELPLQHMVKKGFLTPPIHYDAAIAHYDFSLLTESLDGEQNTDDIALNELIHKHPR
VTKAVTEQILQLSENRQGVMIFAATIDHAKEIVSYLPKEQTALITGKTKLQQRDRLIAAF
KSKQIKYLVNVSVLTTGFDAPHVDVIAILRPTQSISLFQQIVGRGLRLSPGKKDCLVLDY
TNNGYNIFQPEIGEKRPTQDSVAVQIHCPTCDFANTFWGRKDAEGNILEHFGRRCHGLVE
NEEGEEQQCTYRFRFKRCPHCNEENDIAARQCQHCAEKLIDPDDLLRSALNLKNNKVLRC
SAITPTLNVKDKSIQITYHDEDGLTLSETFRFNFKKSRQAFNDLFARRIANGIQSVEFDH
IEEVERFLPYLPAPDFVIAKKQKQHWQVTERLFDYQGPYRKANELR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagccttccaattacgagattaccaagttcacgccgtcgaggcgtctttgaca
cattttcgtaatagcaacgaccctgccgttatcgtccttcctactggggcaggaaaaagc
ctagtcattgccgaattaagccgactggctaaaggccgtgtaatctgtctcgcccacgta
aaagaactggttgaacaaaaccacgcgaagtttctcgcaactggcgcttccgcaggtatt
tattcggcagggctcaagcaaaagtccagcacagagaaaaccacgtttgccagcattcaa
tctctgtcagccaatcttgaagactttaatgaacctgccagcctcataatcattgacgaa
tgccaccgtgtcggcatggaagacggtggccaatacaacaaaaccatcgaacattttcgg
gcactaaaccccaccgtaaaaattcttggtttaaccgcgacaccttatcgattaggcagt
ggctggatctatcaaacccattaccatggctacgccagacattgcacccactcacttttc
aaaaagtgcatctttgaattaccactgcaacacatggtgaaaaaaggttttctaactccc
ccaatccactacgatgcggccattgcgcattatgatttcagcttactgaccgaaagtttg
gatggtgagcaaaacaccgacgacattgcattaaacgaactcattcacaaacatcctcgc
gtcacaaaggcggtcaccgaacaaatattacagctcagtgagaatcgccaaggtgtgatg
atttttgcggcgacgatagatcacgccaaagaaatcgtcagctacttaccaaaagaacaa
acggctttaatcaccggaaaaacaaaactgcagcaaagagacaggttaattgccgcgttt
aaatccaaacaaattaaatacctcgtcaatgtttcggtattgaccacaggattcgacgcg
ccacacgtggacgtgattgcgatattacgcccaacacaatccatcagcctattccaacaa
attgtcgggcgcgggttgagactcagcccaggaaaaaaagactgcctagtattagactac
accaacaatggctacaatatttttcagccagaaataggcgaaaaacgaccgacccaagat
tccgttgccgtacaaatacactgcccaacttgtgactttgccaatactttttggggacga
aaagacgccgaagggaacattttggaacattttggacgtcgatgccacggactagtagaa
aacgaagaaggtgaagaacaacaatgcacgtatcgctttcgctttaaacgctgccctcac
tgcaatgaagaaaacgacatcgccgctcgacaatgccaacattgtgccgaaaagctcatc
gacccagatgacctattaagaagcgcactcaacctaaaaaacaacaaagtccttcgttgc
tctgccatcacccctacgcttaatgtcaaagacaaaagcatacaaatcacttaccacgat
gaagatggcctaacactatccgaaacctttcgttttaatttcaagaagtctcggcaagca
tttaatgacctatttgcccgtagaatcgccaacggtatccaatctgttgagtttgatcac
attgaagaagtcgaacggtttcttccgtatctgccagccccagactttgtgatcgcaaaa
aaacaaaaacaacattggcaagtaacagaacgactgtttgactatcaaggcccttaccga
aaagccaacgagctccgctaa
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