Micrococcus porci: KW076_05420
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Entry
KW076_05420 CDS
T09146
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpor
Micrococcus porci
Pathway
mpor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KW076_05420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpor03021
]
KW076_05420
03400 DNA repair and recombination proteins [BR:
mpor03400
]
KW076_05420
Enzymes [BR:
mpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KW076_05420
Transcription machinery [BR:
mpor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KW076_05420
DNA repair and recombination proteins [BR:
mpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KW076_05420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UBH25617
LinkDB
All DBs
Position
1129589..1133485
Genome browser
AA seq
1298 aa
AA seq
DB search
MTTENPFGLMRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRFKGIICERCGVEVTRSKVRRDRMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEEARHRDLPNLQAEHDQETRVLEDQRDADIAAVAADLEKD
LAKLEAEGAKAAEKKKARDAADKTMAQIRKRADAELDRKAQVWDRFKNLKVADLEGDEGL
YRAMRDKFGAYFEGSMGAEAIQRRLQTFDLAAESELLRETIKTGKGQRKTRALKRLKVVN
AFLTTDNSPEGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNVKSAKRMVERFR
PQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCSAFNADFDGDQ
MAVHLPLSPEAQAEARLLMLSSHNILKPSDGRAVAVPAQDMIIGLNHLTTVRAEGKGAGR
QFATVGEAVMAFDNGELHLNAPATIGVEGFVPSAAVAAPEGWTEGEVALIETTLGKVIFN
DLLPADYPWLDTQATKGTLGQLVNDLAERYPMVVTAQTLDNLKDAGFHWGTWSGVTVAIS
DITSDFDKASIMQGYEDQAQRVQAQYDKGLIADDERRSELIDIWNKATDEVAAAMKAGLS
ELNTINRMVSSGARGNWLQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFSATH
GARKGLADTALKTANSGYLTRRLVDVSQDVIVREDDCGTGRGLSVTIAEPNHDGELVVRE
QVENSAFARTLAQAVTAEDGTVLAEAGADVGDVLIGELVAAGVTEIKVRSVLTCESAVGT
CAKCYGRSMATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRIQ
ELFEARTPKGVAPISEVAGRVTIEDTDASVRLILTPDDGSEEIAYPVLRRARLLVADGEH
VAVGTQLVAGAVDPKQVLRVLGPRAAQRFLVQEVQDVYQSQGVGIHDKHVEVIVRQMLRR
ITVIESGETDLLPGELTDRSRFVAANRAAVAEGKQPAAGRDELMGITKASLATDSWLSAA
SFQETTRVLTQAAMEGKEDPLLGLKENVIIGKLIPAGTGLDRYTQTTVEPTEEAKANLFA
APVGFADFDYPGLDQPLGEAEFHAVSLDDYGRGGDFRA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgaaaaccccttcggcctgatgcgcatcggcctggccaccgcggacgacatc
cgccgctggtcctacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
ccggagaaggacgggctcttctgcgagaagatcttcggcccgacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctcgaaggtccgccgcgaccgcatgggccacatcgagctggccgccccc
gtcacccacatctggtacttcaagggcgtgccctcgcgcctcgggtacctgctggacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgtccgtcgac
gaggaggcgcgtcaccgcgacctgccgaacctccaggcggagcacgaccaggagacccgc
gtcctcgaggaccagcgcgacgccgacatcgccgccgtcgccgccgacctcgagaaggac
ctcgccaagctcgaggccgagggcgccaaggccgccgagaagaagaaggcccgcgacgcc
gcggacaagaccatggcccagatccgcaagcgcgcggacgccgagctggaccgcaaggcc
caggtctgggaccgcttcaagaacctcaaggtcgccgacctcgagggcgacgagggcctg
taccgcgccatgcgggacaagttcggcgcgtacttcgagggctcgatgggcgcggaggcg
atccagcgtcgcctccagaccttcgacctcgccgccgagtccgagctcctgcgcgagacc
atcaagaccggcaagggccagcgcaagacccgcgccctgaagcgcctgaaggtcgtcaac
gcgttcctcaccacggacaactcgcccgagggcatggtcctggacgccgtcccggtgatc
ccgccggagctgcgccccatggtgcagctggacggcggccgcttcgcgacctccgacctc
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctgaagcgactgctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggactcc
ctgttcgacaacggccgccgcggccgcccggtcaccggtccgggcaaccgcccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctgctcggcaag
cgcgtggactactcgggccgctcggtcatcgtggtgggcccgcagctcaagctgcaccag
tgcggcctgccgaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgtctg
gtggacctcaaccacgcccagaacgtgaagtccgccaagcgcatggtggagcgcttccgc
ccgcaggtgtgggacgtgctcgaggaggtcatctccgagcacccggtgctgctgaaccgc
gcccccaccctgcaccgcctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccctgcagctgcacccgctcgtctgctcggcgttcaacgcggacttcgacggcgaccag
atggccgtgcacctgccgctctccccggaggcgcaggccgaggcccgtctgctgatgctc
tcgagccacaacatcctgaagccctcggacggccgcgccgtcgccgtgccggcccaggac
atgatcatcggcctgaaccacctcaccacggtgcgggccgaggggaagggcgcgggccgt
cagttcgccaccgtgggcgaggccgtcatggccttcgacaacggcgagctgcacttgaac
gcgccggcgaccatcggcgtcgagggcttcgtgccgtcggccgccgtggccgccccggag
ggctggaccgagggtgaggtcgcgctcatcgagaccaccctgggcaaggtcatcttcaac
gacctgctgccggccgactacccgtggctggacacccaggccaccaagggcaccctcggc
cagctggtcaacgacctcgccgagcgctacccgatggtcgtcaccgcccagaccctcgac
aacctcaaggacgcgggcttccactggggcacgtggtccggcgtgaccgtggcgatctcc
gacatcacgtccgacttcgacaaggcctcgatcatgcagggctacgaggaccaggcgcag
cgcgtgcaggcccagtacgacaagggcctgatcgcggacgacgagcgccgctccgagctg
atcgacatctggaacaaggccaccgacgaggtcgccgcggccatgaaggcgggcctgtcc
gagctgaacaccatcaaccgcatggtgtcctccggcgcccgaggcaactggctccaggtg
cgccagatcgcgggcatccgcggcctggtggccaacccgaagggcgagatcatcccgcgc
ccgatcaagtcctcctaccgcgagggcctgtcggtgctcgagtacttctcggccacccac
ggcgcccgcaagggcctggcggacaccgccctcaagacggcgaactcgggctacctgacc
cgtcgtctcgtggacgtgtcccaggacgtgatcgtgcgcgaggacgactgcggcaccggc
cgcggcctgtccgtgacgatcgccgagccgaaccacgacggcgagctcgtcgtgcgcgag
caggtcgagaactcggccttcgcgcgcaccctggcccaggccgtcacggccgaggacggc
accgtcctcgcggaggccggcgccgacgtgggcgacgtcctcatcggcgagctcgtggcc
gccggcgtgaccgagatcaaggtccgctccgtgctcacctgtgagtccgccgtcggcacc
tgcgccaagtgctacggccgctccatggccaccggcaagctggtggacatcggcgaggcc
gtgggcatcatcgccgcgcagtcgatcggcgagcccggcacgcagctgaccatgcgcacg
ttccacaccggcggcgtcgcctccgcggacgacatcacgcagggtctgccccgcatccag
gagctcttcgaggctcgcaccccgaagggcgtggcaccgatctccgaggtcgccggccgc
gtgacgatcgaggacacggacgcgtccgtgcgcctgatcctcaccccggacgacggctcc
gaggagatcgcctacccggtgctgcgccgcgcccgcctgctggtggccgacggcgagcac
gtggccgtgggcacccagctcgtggccggcgccgtggaccccaagcaggtcctgcgcgtg
ctcggcccgcgtgccgcccagcgcttcctcgttcaggaggtgcaggacgtgtaccagtcc
cagggcgtgggcatccacgacaagcacgtggaggtcatcgtccgccagatgctgcgccgc
atcaccgtcatcgagtcgggcgagaccgatctgctgccgggcgagctcacggaccgctcc
cggttcgtggcggcgaaccgcgccgcggtcgccgagggcaagcagcccgcggccggccgt
gacgagctgatgggcatcaccaaggcctcgctggccacggactcgtggctgtccgccgcg
tccttccaggagaccacccgtgtcctgacgcaggcggccatggagggcaaggaggatccg
ctgctgggcctcaaggagaacgtgatcatcggcaagctgatcccggccggcacgggcctg
gaccggtacacccagaccacggtcgagcccacggaggaggccaaggcgaacctgttcgcc
gcgccggtcggcttcgcggacttcgactacccgggcctggaccagccgctgggcgaggcc
gagttccacgcggtgtccctggacgactacggccggggcggcgacttccgcgcctga
DBGET
integrated database retrieval system
