Micromonas pusilla: MICPUCDRAFT_16166 Help Entry MICPUCDRAFT_16166 CDS       T02696                                  Symbol JGI:MicpuC2_16166 Name (RefSeq) uncharacterized protein   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism mpp  Micromonas pusilla Pathway mpp03030   DNA replication mpp03410   Base excision repair mpp03420   Nucleotide excision repair mpp03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mpp00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     MICPUCDRAFT_16166 (JGI:MicpuC2_16166)    03410 Base excision repair     MICPUCDRAFT_16166 (JGI:MicpuC2_16166)    03420 Nucleotide excision repair     MICPUCDRAFT_16166 (JGI:MicpuC2_16166)    03430 Mismatch repair     MICPUCDRAFT_16166 (JGI:MicpuC2_16166)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mpp03032]     MICPUCDRAFT_16166 (JGI:MicpuC2_16166)    03400 DNA repair and recombination proteins [BR:mpp03400]     MICPUCDRAFT_16166 (JGI:MicpuC2_16166) Enzymes [BR:mpp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      MICPUCDRAFT_16166 (JGI:MicpuC2_16166)     6.5.1.6  DNA ligase (ATP or NAD+)      MICPUCDRAFT_16166 (JGI:MicpuC2_16166)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      MICPUCDRAFT_16166 (JGI:MicpuC2_16166) DNA replication proteins [BR:mpp03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     MICPUCDRAFT_16166 (JGI:MicpuC2_16166)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      MICPUCDRAFT_16166 (JGI:MicpuC2_16166) DNA repair and recombination proteins [BR:mpp03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      MICPUCDRAFT_16166 (JGI:MicpuC2_16166)    NER (nucleotide excision repair)     Other NER factors      MICPUCDRAFT_16166 (JGI:MicpuC2_16166)    MMR (mismatch excision repair)     Other MMR factors      MICPUCDRAFT_16166 (JGI:MicpuC2_16166) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  9683529 NCBI-ProteinID:  XP_003057721 JGI:  16166 UniProt:  C1MQA0 LinkDB All DBs Position Unknown AA seq 682 aa AA seqDB search MAGGKRAAAAATKKKKSSKKKAKQEANAAGVGDKSVEAAGRLLSYDPAKPVTWKSGEPVP YLFLAEIFESISETTKRLEIAELLTNAFRTILAAGTPEDLLAAVYLASNTIAPQHEGVDL GIGDATLIKMLAEATGRKESAIKSDYTKEGDLGIVAMMSRSTQSMMFAPPKLTIVGVLKE FRAIAKTEGTKSVDQKKGKIKKLLVAARECEAGYVTRSLQGKLRIGLAQQTVTTALAHAV VLHAETKDGKCADGKTHAELADRLGAAVDVLKQVFSECPSFDEIVPALLMDGGIDKLAER CHFRPGVPVKPMLAKPTCGVSEVLQRFSDVEFTCEYKYDGERAQIHLCEDGAVKIFSRNQ EDNTPKFPDVIRALPTYLQEGVKSVVIDCEAVAFDRAEGKILPFQILSTRGRKNIDEKDI KVNVALYAFDCLYLNGENLLQKPMMERRKALYSAFKEVPGEFFFATAKVSRDVEELQVFL EDSIKENTEGLIVKTLDATYEPSKRSLNWLKLKKDYMEGCGDSLDLVPIGAFHGRGKRTG VYGAYLLACYDEESEELQSICKIGTGFSDEALESLSNSLKDTVIDAPRGYYKYGESVAPD VWFAASQVWEVKAADLSISPTHMAAHGLVDSTKGIALRFPRFLRVREDKTPETATSAEQV ADFYNAQATKQEFNNGGDDDEF NT seq 2049 nt NT seq  +upstreamnt  +downstreamnt atggccggcggcaaacgcgccgccgccgcggccaccaagaaaaagaagtcgtccaagaag aaagcgaagcaggaggcgaacgccgccggcgtcggggacaagtccgtcgaagccgcgggc cggctgttatcctacgaccccgcgaagccggtgacgtggaaatccggcgaacccgtgccg tacctgttcctcgcggagattttcgaatccatctccgagacgacgaaacgcctcgagatc gcggagctcctgacgaacgcgttccggacgatcctcgccgcggggacgccggaggattta ctcgccgcggtgtacctcgcgtccaacacgatcgcgccgcagcacgagggcgtcgacttg ggcatcggagacgcgacgctcatcaagatgctcgccgaggcgacgggacggaaagagagc gccatcaagagcgactacacgaaagagggcgacctcgggatcgtcgcgatgatgtccagg agcacgcagagcatgatgttcgcgccgccgaagttgacgatcgtgggcgtgttgaaagag ttccgcgcgatcgcgaagacggagggcacgaagagcgtggatcagaagaagggaaagatc aaaaagctcctcgtcgccgcgcgcgagtgcgaagccggatacgtcacgcgctcgctgcag gggaagctccgcatcgggctcgcgcagcagacggtgacgaccgcgctcgcgcacgcggtc gtgcttcacgcggagacgaaggacgggaagtgcgccgacggaaagacgcacgcggagctc gcggaccgcctcggcgccgccgtcgacgtcttgaagcaagtcttcagcgagtgcccgtcc ttcgacgagatcgtgccagcgttgctcatggacggcgggatcgataagctcgcggagcgg tgccactttcgaccgggggtgccggtgaagccgatgctcgcgaagccgacgtgtggggtc tccgaggtgcttcaacgtttcagcgacgtcgagttcacgtgcgagtataagtacgacggc gaacgcgcgcagattcacctttgcgaagacggcgcggtgaaaattttctcgcggaaccag gaggacaacaccccgaagttcccggacgtgattcgtgcgctgccgacgtacttacaagag ggcgtgaagtccgtcgtcatcgactgcgaggctgtcgcgttcgaccgcgcggaggggaag attctgccgtttcagattctctccacgcgcgggcggaaaaacatcgacgaaaaggatatc aaagtcaacgtcgcgttgtacgcgttcgattgtctgtacctcaacggcgagaacttgctt cagaagccgatgatggagcgacggaaggcgctgtacagcgcgttcaaggaagtcccgggg gagttcttcttcgcgaccgcgaaagtttcgagggacgtcgaggagctgcaggtgttctta gaggactccatcaaggaaaacaccgaaggtctcatcgtcaagacgctagacgcgacgtac gagccgtcgaaacgatcgctgaactggctgaaactgaagaaggactacatggaaggctgc ggggactcgttagacctcgtcccgatcggcgcgttccacggccgcgggaaacgaaccggc gtgtacggcgcatacctcctcgcgtgctacgacgaagagagcgaggagctgcagtcgatt tgcaaaatcggcacggggttcagcgacgaggcgctcgagtcgttgtccaactcgctgaag gacacggtcatcgacgcgccgcgggggtattacaagtacggcgagtccgtcgccccggac gtgtggttcgccgcgtcgcaggtgtgggaggtgaaagccgcggatttgtcgatatcgccg acgcacatggccgcgcacggattggtcgactcgacgaagggcatcgcgttacggtttccg cggtttttacgcgtcagggaggacaagaccccggagacggcgacgagcgcggagcaggtg gcggacttttacaacgcgcaggcgacgaagcaggagttcaacaacggcggggacgacgac gagttttaa

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