Micromonas pusilla: MICPUCDRAFT_34341
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Entry
MICPUCDRAFT_34341 CDS
T02696
Symbol
JGI:MicpuC2_34341
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mpp
Micromonas pusilla
Pathway
mpp03082
ATP-dependent chromatin remodeling
mpp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
03083 Polycomb repressive complex
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpp03036
]
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
Enzymes [BR:
mpp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
Chromosome and associated proteins [BR:
mpp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
HDAC complexes
Sin3A-HDAC complex
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
BRAF-HDAC complex
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
REST complex
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
SHIP complex
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
MiDAC complex
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
Heterochromatin formation proteins
Other heterochromatin formation proteins
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
Chromatin remodeling factors
NuRD complex
MICPUCDRAFT_34341 (JGI:MicpuC2_34341)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
9685298
NCBI-ProteinID:
XP_003060152
JGI:
34341
UniProt:
C1MW44
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MAPSKDRISYFYDADVGTSYYGNNHPMKPHRLAMTHHLVLSYDLHKKMEVYRPRRSYPVE
MSQFHAEDYVDFLSRITPDTQQDHTEQMQRYNLGEDCPIFDGLFDFCKLYTGGSIDGAVR
LNHGLSDIAINWSGGLHHAKKSEASGFCYINDLVLAILELLKHHPRVLYIDIDIHHGDGV
EEAFYLTDRVMTVSFHKYGDMFFPGTGALKDVGGDAGKYYSVNVPLLDGMDDAGFRAIFK
SVMQKVMDVYQPGAVVLQCGADSLAADRLGCFNLTLDGHADCVKFMKRFNVPLLVTGGGG
YTKSNVARCWTYETAALLDKTLSTDIPEHDFYYEYYADVGYKMKVQPTNYIENLNTKTYL
QDVKQQVMENLRALEHAPGVGMHEVPPDSMIPEFDEDELNPDERYGGAAGMDKLVFGDDE
FYEDDKDQDR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgagcaaggaccgcatctcctacttctacgacgcggacgttgggacgtcgtac
tatgggaacaatcacccgatgaagccgcatcgtctcgcgatgacgcatcacctcgtgctg
tcgtacgatctgcacaagaagatggaagtctaccgcccgcgtcggtcgtaccccgtggag
atgtcgcagttccacgcggaagattacgtggatttcctctctcgcatcaccccagacacg
caacaggaccacaccgagcagatgcaacggtataacctcggcgaggactgccccatattc
gacggtctgtttgacttttgcaagctgtacacgggcgggagcatcgacggcgcggtgcga
ttgaaccacggcctcagcgacatcgcgatcaactggtccggggggttacaccacgcgaag
aagtcggaggcgtccgggttctgttacatcaacgatttagtcctcgcgatcctcgaactc
ctgaagcatcacccgagggttctgtacatcgacatcgacatccaccacggcgacggcgtg
gaagaagctttttatttaaccgacagagtcatgaccgtgtcgttccacaagtacggcgac
atgttcttccccggcaccggcgcgctcaaagacgtcggcggcgacgcggggaaatattac
agcgtcaacgtccctctcctagacggcatggacgacgccgggtttagggccatcttcaag
tccgtgatgcagaaagtcatggacgtgtaccagcccggcgcggtcgtgcttcagtgcggc
gcggactcgctcgcggcggacaggttaggatgcttcaacctgacgttggacggacacgcg
gactgcgtgaagtttatgaagcggttcaacgtgcctctgctggtgacgggcggcggcggg
tacacgaagtccaacgtcgcgcggtgctggacgtacgagaccgcggcgcttctggacaag
acgttgtccacggacatcccggagcacgatttctactacgagtactacgcggacgtgggg
tataagatgaaggtgcagccgacgaattacatcgaaaacttgaacacgaagacgtacctg
caggacgtaaagcagcaggtgatggagaacttgcgcgcgttggagcacgcgccgggggtg
gggatgcacgaggttccgccggactcgatgatcccggagtttgacgaggacgagttgaac
ccggacgagaggtacggcggcgcggcgggaatggacaagttggtcttcggcgacgacgaa
ttttacgaggacgacaaggaccaagaccggtga
DBGET
integrated database retrieval system