Micromonas pusilla: MICPUCDRAFT_46013
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Entry
MICPUCDRAFT_46013 CDS
T02696
Symbol
JGI:MicpuC2_46013
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mpp
Micromonas pusilla
Pathway
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_46013 (JGI:MicpuC2_46013)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_46013 (JGI:MicpuC2_46013)
03009 Ribosome biogenesis [BR:
mpp03009
]
MICPUCDRAFT_46013 (JGI:MicpuC2_46013)
Enzymes [BR:
mpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUCDRAFT_46013 (JGI:MicpuC2_46013)
Spliceosome [BR:
mpp03041
]
Complex A
U1 snRNP components
U1 related factors
MICPUCDRAFT_46013 (JGI:MicpuC2_46013)
Complex B
MICPUCDRAFT_46013 (JGI:MicpuC2_46013)
Ribosome biogenesis [BR:
mpp03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUCDRAFT_46013 (JGI:MicpuC2_46013)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
9689487
NCBI-ProteinID:
XP_003064234
JGI:
46013
UniProt:
C1N8A2
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRAHRAPGGFVAPRAVAHLRPPHHAIKVAAGTPDPIVTFQRAPFPKKLIAALLKQGYASP
TPIQAQAWPIAVTGRDVIAVAKTGSGKTCAFLLPALSRIMKTGASAAPDMEMVDGRPAAV
VPAAIVLAPTRELAIQIGDECAKFCPAAGAKTVTLYGGASKGDQLRALRGGADMIVATPG
RLIDFLAPPPGFSAPVSAKNAKYVVLDEADRMLDMGFEPQIKKILKLCPDARQTLMFTAT
WPEAVKKIAAQFTSADAAHVRIGDGGERLTANKSITQTVEIIDEEDKLRRAIEVLKAELV
DGKRGIVFCGTKRRCDFIDRKIKPATCEARGRFTGIRTKPSARKAPLLVATDVAARGLDI
PGVAVVLVYDFPLQTEDYVHRIGRTGRAGLTGKAHCFFTSDNAHQAKELVQILQGAEQEI
PEVLLEMAERQRGGKGGRGGGRFGGGGGRFGGRGGRFGGGGGRFGGGRGGRFGGGRGGGR
GRGKW
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacatcgggcacccggtgggtttgtcgctcctcgtgcggttgcacaccttcgc
cctccacaccacgcgatcaaggtggccgcggggacgccggacccgatcgtgacgttccag
cgcgcgccgtttccgaagaagctcatcgccgcgttgctgaagcaaggctacgcgtcgccg
acgcccattcaagcgcaggcgtggcccatcgcggtgaccgggagagacgtcatcgccgtc
gccaagacgggcagcggcaagacgtgcgcgttcctcctccccgcgctgtcgcggataatg
aagaccggcgcgtccgcggcgccggacatggagatggtagacggccgaccggcggcggtg
gtccccgccgcgatcgtcctcgcgccgacgcgcgagctcgccatacagatcggcgacgag
tgcgcgaagttctgccccgccgcgggcgcgaagacggtgacgctgtacggcggcgcgtcc
aagggggaccagctgagggcgctgcgaggcggcgcggacatgatcgtcgcgacgcccgga
cgactgatcgatttcctcgcgccgccccccgggtttagcgcgccggtcagcgcgaagaat
gcaaagtacgtcgtgctggacgaggcggacaggatgctggacatggggttcgagccgcag
atcaagaagatcctgaagctgtgcccggacgcgaggcagacgctgatgtttaccgcgacg
tggccggaggccgtgaagaagattgcggcacagtttacgagcgccgacgcggcgcacgtt
cggatcggcgacggcggcgagcggctgaccgcgaacaagtcgatcacgcagaccgtggag
atcatcgacgaggaggataagctgcggcgcgcgatcgaggtgttgaaggcggagctcgtg
gacgggaagagagggatcgtgttctgcggcacgaaacgacggtgcgatttcatcgaccga
aagattaagccngcaacttgcgaagcgcgggggcgattcacggggataaggaccaagccg
agcgcgaggaaggcgccgctgctggtcgccacggacgtcgccgcgcgagggttggacatc
cccggcgtcgccgtcgtcttggtgtacgactttccgcttcagacggaagattacgtccac
agaatcggacgcaccggtcgcgcggggctcacgggcaaggcgcactgtttcttcacgagc
gacaacgcgcatcaggcgaaggagctcgtgcagatcttgcagggcgcggaacaggagatc
ccggaggtgctgctggagatggcggagcggcagcgaggagggaagggagggagaggaggg
ggacgattcggcgggggcgggggtcgattcggcggtcgcgggggacgattcggcggcggc
ggcgggcggttcggcggcggaagaggcgggcggtttggcggcggaaggggcggaggacgc
ggccgcgggaagtggtga
DBGET
integrated database retrieval system
