Marinomonas profundi: J8N69_09490
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Entry
J8N69_09490 CDS
T07858
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mprf
Marinomonas profundi
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mprf03000
]
J8N69_09490
Transcription factors [BR:
mprf03000
]
Prokaryotic type
Helix-turn-helix
Other families
J8N69_09490
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA_2
HTH_8
AAA_3
HTH_22
HTH_7
PAS
HTH_30
HTH_23
HTH_29
HTH_17
nSTAND3
CcdB
Phage_NinH
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UDV01844
LinkDB
All DBs
Position
2040788..2042797
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AA seq
669 aa
AA seq
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MQDEEQQQKPEALTGTEALTGSEALAGQTHKERIQASWYRCEQFGLEHGSRPDFATLPKG
TLGDLIDQHRSLLETTENEVLPYYQNILSNSACMIVLADRQGHVLNTWGQPRFGSAAEHG
LIGGNQWSEMGAGTNAIGTALITGQAIQVGRDEHFLRANRFMVGSASPIYNAKNDLVGVL
DISSDAYLPQDHTFGMVKLMSLSVENRLIFSAFQKEHFILSFNTNVSSLDSHWSGILVLD
ENGTIVSANRRAEVVLARDLALLNINQVFDIEMREIKHHPFSLPLKLIAMGRYQFYVKVI
PPVQQIMRVPDFRQRADYVAPSQPEAIVMTEKKPPTEKTTKAENPPSITIPDNVIPMAEL
QHGDERVERLVRQAHKIMEKDIPILIHGETGAGKEIFVRSLHYHSSRAKEMLVAVNCAAI
PAELVESELFGYEKGAFTGAQNRGSIGLIRRAHRGTLFLDEIGEMPMMVQSRLLRVLQER
VVTPLGSTEAFPVDIKLISATNRILKDEVKEGRFRQDLYYRISGLNIELPALRERTDKAA
LIQYLHERLRKEEPGPALSPDMLELLVRHPWPGNMRQLVHVLKVGMAMADEETLEEWHLP
DDFFDDLDAMAAQTEEASQNPNSEQDEPLEKLIPRLLNEFKGNVSQTAKTAGVSRNTVYK
YARAKGNDV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatgaagaacaacaacaaaaaccagaagcgcttactggaacagaagcactcacc
gggtcagaagcactggccggacagacacacaaagagcgaatccaagcgtcttggtatcgt
tgcgagcaatttggcttagagcacggcagtcgccccgactttgcaactttgcccaagggg
acgttgggcgatctgatcgatcagcatcgtagcttgttggaaaccacagagaacgaagta
ctgccgtactaccaaaatattctgagtaattcggcctgtatgattgtactggctgaccgc
caaggtcatgtcttgaatacgtgggggcagccgcgctttggcagtgcggcggagcatggt
ttgattggtggtaatcaatggagcgagatgggcgcgggcaccaatgccatcggcacagca
ttgattaccggccaagccattcaagtgggccgtgatgagcattttttacgcgccaaccgc
tttatggtgggttcggcgtcgcctatttacaacgcgaaaaatgatttggtcggcgtgttg
gacatttcttcagacgcgtatctgccgcaggatcatacttttggtatggtcaaactgatg
tcgttgagcgtggaaaatagactgatattttccgcctttcaaaaagaacatttcatcctc
agttttaataccaatgtgtccagtttggacagtcattggtcgggtattctggtgctcgat
gaaaacggcaccatcgtatcggcgaatcgtcgtgccgaggtggtgttagcgcgggatttg
gccttgctcaatatcaatcaggtgtttgatatcgaaatgcgtgagatcaagcaccaccct
tttagtttgccactgaaactgatcgccatgggacgttaccagttttatgtcaaagtgatt
ccgcccgtccagcaaattatgcgtgtgcctgacttccgccagcgtgctgattatgtcgcg
ccttcccaaccagaagcgattgttatgactgaaaaaaaaccgccgacagaaaaaacaaca
aaagcggaaaatccaccgtcaattaccattcctgataacgtcattccaatggccgaattg
cagcacggtgatgagcgtgttgaacgcttagtacgccaagcgcacaagatcatggagaaa
gacattcctatcctgattcatggcgaaaccggcgcgggtaaagagatttttgtgcgcagt
ttgcactatcacagctctcgtgccaaagagatgttagtggcggtaaattgcgcggccatt
ccggcggaactggttgagtctgaactttttggttatgaaaaaggcgcctttacgggagcg
caaaaccgaggctcaataggattgattcgtcgtgcgcatcgtggcaccttatttttggat
gaaatcggtgaaatgccgatgatggtgcaatcgcgtttattgcgagttttacaagaaaga
gtggtgacaccattgggttcgacagaagcctttccggtcgatatcaaactgatttcagcc
accaaccgaattttaaaagacgaagtaaaagaagggcgttttcgccaagatttgtactat
cgaatttccggtttgaacatcgaattacccgctctgcgagaacgaacggacaaggcggca
ttgattcaatatctccacgaacgtttacgcaaagaagagccggggccggccttatcacca
gacatgcttgaattattagtgcgacacccttggccgggtaacatgcgccaactcgttcat
gtattaaaagtcggcatggccatggccgatgaagaaacccttgaagaatggcacttgcct
gatgacttctttgatgatcttgatgcgatggcggcgcagacagaagaagcgtcacaaaat
ccaaatagcgagcaagatgagccgttggaaaaactgattcctcgactcttaaatgagttc
aaaggcaatgtatcgcagaccgcgaaaaccgctggcgtgagccggaatacggtttataaa
tacgctagagcgaaaggaaatgatgtctaa
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