Metallosphaera prunae: DFR88_08955
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Entry
DFR88_08955 CDS
T05966
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mpru
Metallosphaera prunae
Pathway
mpru00521
Streptomycin biosynthesis
mpru00523
Polyketide sugar unit biosynthesis
mpru00525
Acarbose and validamycin biosynthesis
mpru01100
Metabolic pathways
mpru01110
Biosynthesis of secondary metabolites
mpru01250
Biosynthesis of nucleotide sugars
Module
mpru_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mpru00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DFR88_08955 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DFR88_08955 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DFR88_08955 (rfbB)
00525 Acarbose and validamycin biosynthesis
DFR88_08955 (rfbB)
Enzymes [BR:
mpru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DFR88_08955 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
adh_short
NAD_binding_4
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QCO30596
UniProt:
A0A4D8S002
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Position
complement(1651919..1652896)
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AA seq
325 aa
AA seq
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MQGKVLVTGGYGFIGSNFVRMIANQADVVVVDNFSVGSNRANLRDVPVKTVELDIRDPRM
LDLIRDERPDFIFNFAAESHVDRSIVDPLSFVSTNVLGTANLLEGARRYDVTFIQIGTDE
EYGEIYSGSFRETDPLNPSSPYSASKAGATLLAMAYARTYHLDVRVTRSANNYGPYQYPE
KLIPKTVIRALHNLPVPVYGTGKNVRDWIYVQDNCEAILTVAEKGKPGIYNVSAGEEKTN
LEVVTTILEILGKPNLIKFVEDRPGHDFRYSVDSTKLRELGWRPRTSFREGISLTVDWYV
KNRWWWEGINSRVLEETPFRGSVNG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaaagtcctagtcactggaggctacgggttcataggttccaatttcgtgagg
atgatcgctaaccaggcagacgttgtggttgtggacaacttctccgtggggtccaatagg
gccaacctacgtgacgtccctgtcaagacagttgaactggatattcgggaccccaggatg
ctcgaccttatccgcgacgagaggcctgacttcatcttcaacttcgcagctgagagccac
gtggaccgcagtattgtggacccgctctcctttgtctcaactaacgtcctcgggaccgcg
aacctcctagaaggggcaaggcgttacgacgtcaccttcattcagataggtacagatgag
gagtacggcgagatctactcagggtccttccgagaaactgaccccctcaacccctcttcc
ccctactctgcctcaaaggctggcgccactctcctagccatggcctacgcccgcacatat
cacctggacgttcgggttacgaggagcgccaacaattacggtccctatcagtacccggag
aagttgattccgaagactgtgataagggcgcttcacaacctcccggttcccgtgtacggc
acggggaagaacgttagggactggatttacgttcaggataactgcgaggctatcctcacg
gttgctgagaaggggaagcccggcatctataacgtatccgcgggggaggagaagactaac
ctagaggtggttaccacgatcctcgagatacttgggaagccgaacctcatcaagtttgtg
gaggataggcctggacacgacttcaggtatagcgtggattccacgaagttgagggaactg
gggtggaggcccaggacgagtttcagggaggggatttcgctcactgtggattggtacgtg
aagaataggtggtggtgggaggggattaacagcagggtgctagaggaaacgccgtttaga
ggatcagtgaatgggtga
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