Melissococcus plutonius ATCC 35311: MPTP_1644
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Entry
MPTP_1644 CDS
T01492
Name
(GenBank) cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mps
Melissococcus plutonius ATCC 35311
Pathway
mps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPTP_1644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mps03019
]
MPTP_1644
03009 Ribosome biogenesis [BR:
mps03009
]
MPTP_1644
Enzymes [BR:
mps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MPTP_1644
Messenger RNA biogenesis [BR:
mps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPTP_1644
Ribosome biogenesis [BR:
mps03009
]
Prokaryotic type
rRNA helicases
MPTP_1644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAK22071
UniProt:
F3YC43
LinkDB
All DBs
Position
complement(1696730..1698238)
Genome browser
AA seq
502 aa
AA seq
DB search
MKFKELGLSSQLLLAIERSGFEEATPIQAETIPLALKGKDVIGQAQTGTGKTAAFGLPML
EKIDTKNQKLQGLVIAPTRELAIQTQEELYRLGRDKKIKIQAVYGGADIGRQIRALKERP
QIVVGTPGRLLDHLNRRTLKLEVIETLVLDEADEMLNMGFLEDIEKIISQVPENRQTLLF
SATMPTAIKNIGIKFMKNPDHVKIKAKEMTADLIDQYYVRSKDYEKFDIMTRLLDVQTPE
LTIVFGRTKRRVDELARGLETRGYKAEGIHGDLSQQKRMSVLRAFKNGDLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYLHVIEDLTKK
RMSTLRPPTETEAFKGQLGAAIEDIEKKMEENGLEKYLKSAENLLEKYSSEDLVALLLKV
VSKDPSDMVPVKITPERPLPSTKKGFNKNNQSNGNYRSRKGKDNYRGKNNRSGGGYTKNN
RSANTKRNENKKRNFVIRDNSN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaactaggattatcatcacaactattattagctattgaacgttcaggc
tttgaggaggcaacaccgattcaagcagaaacaattccattggctttaaagggtaaggat
gttattggacaagcacaaacagggacagggaaaacagctgcctttggattaccaatgtta
gaaaaaattgatacaaaaaaccaaaaattacaaggattggtaattgcaccaacaagagag
cttgcgattcaaactcaagaagaattgtatcgtttaggtagagataagaagatcaaaatt
caagctgtttatggtggtgctgatattggtagacaaatccgtgcattaaaagaacgtcca
caaatcgttgttggaactccaggtcgtttattggatcatttaaatcgtcgaacattaaaa
ttagaagtaattgaaacactagttttagatgaagcagatgaaatgttgaatatgggcttt
ttagaagatattgaaaaaatcatttcacaggttcctgaaaatcgacaaacgttgttattc
tcagcaacaatgccgactgcgattaaaaatattggcataaaatttatgaaaaatcctgat
catgttaaaattaaagcaaaagagatgactgctgatttaattgatcaatactacgtgcgt
tcaaaggattatgaaaaatttgatattatgactcgtcttttggatgttcaaacaccagag
ttgaccattgtttttggtagaacaaaacgtagagtagatgaattggctagagggcttgaa
actcgtggctataaagcagaaggaatccatggtgatctctctcaacaaaaacgaatgagc
gttttacgtgcttttaaaaatggagatttggacattttagtagcaacagatgtggcggct
agaggattagatatttctggcgtgacccatgtttataattatgatattccacaagatcca
gaaagctatgttcatcgtattggtcgtactggacgtgctggtaagggtggtatgtctgtt
acttttgtaacaccaaatgagatgggctatttgcatgtgattgaagatttaacgaaaaaa
cgtatgtctactttgcgtccaccaaccgaaacagaagcgtttaaaggacaattgggggca
gcaattgaagatattgagaaaaaaatggaagaaaatgggttagagaaatatctaaaatca
gctgaaaacttattggaaaaatattcatcagaagatttggtagctttattattaaaagtt
gtttctaaggatccatcagatatggtaccagttaaaattactccggaacgtcctttgcca
tcaaccaaaaaaggatttaataagaataatcaatccaacggaaattatcgcagtcgaaaa
ggcaaagataattatcgaggaaagaataatcgtagcggaggcggttatacaaaaaacaac
agatctgcaaatacaaagcgtaatgaaaacaaaaaacgtaattttgtaattcgtgataac
tcaaattaa
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