Mycobacterium pseudoshottsii: MPSD_12230
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Entry
MPSD_12230 CDS
T07300
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mpse
Mycobacterium pseudoshottsii
Pathway
mpse00521
Streptomycin biosynthesis
mpse00523
Polyketide sugar unit biosynthesis
mpse00541
O-Antigen nucleotide sugar biosynthesis
mpse01100
Metabolic pathways
mpse01110
Biosynthesis of secondary metabolites
mpse01250
Biosynthesis of nucleotide sugars
Module
mpse_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mpse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MPSD_12230 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MPSD_12230 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MPSD_12230 (rmlC)
Enzymes [BR:
mpse01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MPSD_12230 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
BBA86877
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All DBs
Position
complement(1327511..1328116)
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AA seq
201 aa
AA seq
DB search
MQARELKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAFCGHRFDVRQANCSVSSAGVLRG
LHFAELPPSQAKYVTCVSGAVFDVVVDIRLGSPTFGQWDSVLLDDRHRSIYISEGLAHGF
LALQDKSTVMYMCSAEYNPQREHTICATDPELAIDWPLVDGAPPSLSERDAAAGSLDEVR
ASGVLPTWEETQRFIDGLRGT
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacgcgaactcaaagttccaggcgcgtgggagatcaccccgaccatccacggt
gattcccgcggcatgtttttcgaatggctcaccgacagcgggttcaccgccttctgcggt
catcgcttcgacgtccgccaagccaactgctcggtgtcgtcagccggcgtgctgcggggt
ctgcacttcgccgagctgccccccagccaggccaagtacgtcacctgcgtatcaggcgcg
gtgttcgatgtcgtcgttgacatccgtttgggttcaccgacattcggccagtgggactcg
gtactgctcgacgatcgccaccgatcgatttacatctcggaaggacttgcgcacggtttc
cttgcgctgcaagacaaatcaacggtgatgtacatgtgttcggccgagtacaacccgcag
cgcgagcacacgatctgcgcgaccgaccccgaactggcgatcgactggcccctggtcgac
ggcgcccctcccagcctgtctgaacgcgatgcggcggccggcagcctcgatgaagtgcgc
gcttcgggggtcctgcccacttgggaagagacccagaggttcatcgacggcctgcggggt
acctag
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