Microbacterium rhizosphaerae: SM116_03405
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Entry
SM116_03405 CDS
T09585
Symbol
pulA
Name
(GenBank) pullulanase-type alpha-1,6-glucosidase
Organism
mrg
Microbacterium rhizosphaerae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Pullul_strch_C
Pullulanase_N2
CBM_48
Alpha-amylase_C
AMPK1_CBM
Malt_amylase_C
DUF5696
Motif
Other DBs
NCBI-ProteinID:
WPR90349
LinkDB
All DBs
Position
733534..739314
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AA seq
1926 aa
AA seq
DB search
MSKTTRAWRALALSLTAALVAVGGIVAVTTPATAAARTFTLVGDLQSELGCASDWAPDCA
QTALVSTDKPGIYAADFTVPAGTWNYKVAVNGTWDESYGLNGGGDNIPLTVAGPTQLRFE
FDDNAHKVGVEVAPAALRAGYTSDDDALVAAPARQKGADQQFYFVMTDRFANGDTSNDTG
GLTGDRMTTGFDPTDKGFYEGGDLAGLHSKLDYIQGLGTTAIWLTPSFKNKPVQGTGADA
SAGYHGYWITDFTQIDPHLGTNDELKSLIADAHARGIKVYFDIIVNHTADVISYAENQYS
YIDQATKPYKDASGKAFDPADYAGGDTFPTMDPATSFPYTPVVSDAEKDIKVPSWLNDVT
LYHNRGDSTYTGESTTYGDFSGLDDLMTENPKVVNGFADVYDTWIDTGIDGFRIDTAKHV
NFEFWQKWTTKVLDYAHSHGKPDFFMFGEVYDADPVKLSPYVRKTDMNSVLDFTFQSSAT
SYASGNSAKGLRTLFAGDDHYTTSTTSATALPTFLGNHDMGRIGYFLRNTSQPLQRDLLA
HDLMFLSRGQPVVYYGDEQGYAGADPGNDKSARQSLFPTQVAEYANQSLVDGTPLGTGAH
YGTSTPEYTQIAALSALRKANPALQDGAQIERYAADGAGVYAFSRVDRSDKLEYLVALNN
ATTPQTVSLATLTAGAHYASIYGGGAALTTDGAAKTSVTVPALSAVVYKADRSVSAPDAA
SAVTISAPAAGAAMTGSAAVSATVDDAWRETSFAWRVVGSSDWHALGTSETTTPRVFHDV
NTLAKGTLVEYRAVSTDAAGHRSAASTYASVGNAVNLGAADQPTAGYGSVSIPGDLDTEM
GCAGDWQPDCAAAHLTKRADGIWAGTFDLPAGDYQYKVAIDDSWTLNFGANGVKDGPNIS
LHHPGGTVTFYFDPRSNQVQTTDDGPIVTLPGSFQAAIGCPGDWAPDCLASLMSDGDRDG
VYEFSTDRIPTGAYEVKVAHNLGWDVNYGANGVPGGANMSFSATTGKQVLFRYTLATHIL
EIIVTDPPLAGLGESRAQWIDASTIAWPADLGSKDAAATWQLYGSADASLEVKDGAVTGG
GDPIALTKVAGGLTDAQKARFPALAGYTALHVEGQDRAGVATLLKGQLRVAQRDGADALS
AFTGVQIPGVLDDLYAKAVGAVPLGVAFQGAQPTFRVWAPTAQTATLLTWDPSTGSGTAA
AGDPVRREATWDAASGVWTVKGGAALKGSEFLWEVKVYAPTTGRIETNRVTDPYSVALTT
NSTRSVAVDLDDQKWRPDQWRKTASPVVAKPVDHTIYELHIRDFSISDTTVPAALRGTYS
AFTRDSAGTKHLRELADAGINTVHLLPSFDLATIQEDRSKQSTPDCDLTTMGAASPDQQA
CVMAQADTDGYNWGYDPFHYSTPEGSYAVDPNGGSRVSEFRQMVGALHGMGLQVVLDQVF
NHTTASGQADTSVLDQVVPGYYQRLNAAGAVETSTCCQNVATEHAVAQKLMVDSIVTWAK
EYKVDGFRFDLMGHASKANMLAIRSALDALTLKKDGVDGKAVYLYGEGWNFGEVANNALF
EQATQGQLGGTGIGTFNDRLRDAVHGGSPVDGGSTFVQGFGTGLATDPNGDAINGSGAQQ
LAALGHDTDLVKLGLAGNLRSYSFLTSDGTVKQGSQIDYNGQAAGYADQPDEVINYVDAH
DNETLYDLSVFKLPRGTSMADRVRMNTLQLATVTLSQTPSFWQAGTELLRSKSLDRNSYN
SGDWFNRIDWTGKQNTFGSGLPPAADNSGKWSIMAPLLADPTLKPKAADMAAADAAAMDL
LKVRSQVGLLRLGSADLISQKVSFPNGGAQATPGVLVMLVDDEAGADVDPALDGALVVFN
ASPQATTQTIGSLTGRDFRLVAAQANGSDAVVRTTTWDTATGTVTVPARSVAVLVQKEAP
LRGSLR
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagacgacccgcgcctggcgcgcactcgctctgtccctcaccgcggccctcgtc
gccgtcggcggcatcgtcgcagtgaccaccccggccaccgccgccgcgcggaccttcacc
ctcgtcggcgatctgcagagcgagctcggctgcgcctccgactgggctcccgactgcgcc
cagaccgccctcgtgtccaccgacaagccgggcatctacgccgcggacttcacggttccc
gccggcacctggaactacaaggtcgccgtcaacggcacgtgggacgagtcgtacggcctg
aacggcgggggcgacaacatccctctgacggtcgcggggccgacgcagctgcgcttcgag
ttcgacgacaacgcgcacaaggtgggcgtcgaggtcgctccggcggcgctgcgcgccggc
tacacgtccgacgacgacgcgctcgtcgccgctcccgcgcgtcagaagggcgccgaccag
cagttctacttcgtgatgaccgatcggttcgcgaacggcgacacgtcgaacgacaccggc
ggtctcaccggcgaccggatgaccaccgggttcgacccgaccgacaagggcttctacgag
ggcggcgacctcgccggcctccactcgaagctcgactacatccagggtctcggcacgacc
gcgatctggctcacgccgagcttcaagaacaagcccgtgcagggcaccggcgccgacgcg
agcgccggctaccacggctactggatcaccgacttcacgcagatcgacccgcacctcggc
acgaacgacgagctcaagtcgctgatcgccgacgcgcacgcgcggggcatcaaggtctac
ttcgacatcatcgtgaaccacaccgccgacgtcatctcctacgccgagaaccagtactcg
tacatcgaccaggcgaccaagccgtacaaggatgcatccggcaaggcgttcgacccggcc
gactatgcgggcggtgacaccttcccgaccatggatccggccacgtcgttcccctataca
ccggtcgtgtccgatgccgagaaggacatcaaggtgccgtcgtggctgaacgacgtgacg
ctgtaccacaaccgcggcgactcgacgtataccggggagtccacgacatacggcgacttc
agcggcctcgacgacctcatgacggagaacccgaaagtcgtcaacggattcgccgacgtc
tacgacacctggatcgacacgggcatcgacggattccgcatcgacacggccaagcacgtg
aacttcgagttctggcagaagtggaccacgaaggtcctcgactacgcgcacagccacggc
aagcccgacttcttcatgttcggcgaggtctacgacgccgacccggtgaaactctcgccg
tacgtccgcaagaccgacatgaactcggtgctcgacttcaccttccagtcgtcggcgacc
agctacgcctccggcaactcggcgaagggtctgcggacgctcttcgccggcgacgaccac
tacacgacgtccacgacctcggccacggcgctgccgacgttcctcggcaaccacgacatg
ggtcgcatcggatacttcctgcgcaacacgtcccagccgctgcagcgcgacctgctcgcc
cacgacctcatgttcctgagccgtggccagcccgtcgtctactacggcgacgagcagggc
tacgcgggcgcggatccgggcaacgacaagagcgcacgccagtcgctgttcccgacccag
gtggcggagtacgcgaaccagagcctcgtcgacggaacgccgctcggcaccggtgcgcac
tacggcacgagcacgcccgagtacacgcagatcgccgcgctctccgccctgcgcaaggcg
aaccccgcgctgcaggacggtgcgcagatcgagcggtacgccgccgacggcgcgggcgtc
tacgccttctcgcgcgtggaccgctcggacaagctcgagtacctcgtcgcgctgaacaac
gcgaccacgccgcagacggtgagcctcgcgaccctgacggccggcgcgcactacgcgtcg
atctacggcgggggagcggcgctcacgacggatggcgccgccaagacgtccgtcaccgtg
ccggcgctgtccgccgtggtgtacaaggccgaccgctcggtgagcgcgccggatgcggca
tccgccgtcacgatctcggcgcccgccgccggggccgccatgaccggatcggccgccgtc
tcggcgacggtcgacgacgcctggcgcgagacgagcttcgcgtggcgtgtggtcggatcg
agcgactggcacgcgctcggcacgtccgagacgaccacgccgcgcgtcttccacgacgtc
aacacgctcgcgaagggcacgctggtcgagtaccgcgcggtgtcgacggatgccgcgggc
caccgctccgccgcctcgacctacgcctcggtcggcaatgcggtgaacctcggcgccgcc
gaccagccgacggccgggtacggctcggtcagcatcccgggagatctcgacaccgagatg
ggatgcgccggcgactggcagcccgactgcgccgcggctcacctcaccaagcgcgccgac
ggcatctgggccggcacgttcgacctgcccgcgggcgactaccagtacaaggtcgccatc
gacgacagctggaccctcaacttcggggcgaacggcgtgaaggacggaccgaacatctcg
ctgcaccacccgggcggcacggtgacgttctacttcgacccgcgctcgaaccaggtgcag
acgacggacgacggtccgatcgtgacgctgcccggctcgttccaggccgcgatcggatgc
cccggcgactgggcgccggactgcctcgcctcgctcatgagcgacggcgaccgcgacggt
gtgtacgagttctcgaccgaccggatcccgaccggcgcctacgaggtcaaggtcgcgcac
aacctcggctgggacgtcaactacggcgcgaacggcgtgccgggcggagcgaacatgtcg
ttcagcgccaccaccggcaagcaggtgctgttccgctacaccctggcgacccacatcctg
gagatcatcgtcaccgacccgccgctggccggactcggggagtcgcgtgcgcagtggatc
gacgcatccaccatcgcgtggcccgccgatctcggatcgaaggatgccgcggccacgtgg
cagctgtacggctccgccgacgcgagcctcgaggtgaaggacggcgccgtcacgggcggc
ggcgacccgatcgccctcacgaaggtcgccggtggcctgaccgacgcgcagaaggcgagg
ttcccggcgctcgcggggtacacggccctgcacgtcgagggtcaggaccgcgctggggtc
gccaccctgctgaagggacagctgcgcgtcgcgcagcgcgacggcgcggatgcgctgagc
gcgttcaccggtgtgcagatccccggcgtcctcgatgacctgtatgcgaaggccgtcggt
gcggtgcccctcggcgtcgccttccagggtgcgcagcccacgttccgcgtgtgggcgccg
acggcgcagacggcgacgctgctgacgtgggacccttcgacgggctcagggaccgccgcc
gccggtgatcccgtccgtcgcgaggcgacgtgggatgcggcatccggtgtctggacggtc
aagggcggtgctgcgctcaagggctccgagttcctgtgggaggtgaaggtctacgccccg
accacgggcaggatcgagacgaaccgcgtcaccgacccgtactccgtcgcgctcacgacg
aactcgacgcgctcggtcgccgtcgacctcgacgaccagaagtggcggccggaccagtgg
cgcaagacggcgtcgccggtcgtggcgaagcccgtggaccacaccatctacgagctgcac
atccgcgacttctcgatctcggacacgacggttcctgccgccctgcgcggcacgtactcg
gccttcacccgagacagcgcgggaacgaagcacctgcgcgagctcgccgacgccggcatc
aacaccgtgcacctgctgccgtcgttcgacctcgcgacgatccaggaggatcgctcgaag
cagagcaccccggactgcgacctcacgacgatgggggcggcatcccccgaccagcaggcg
tgcgtgatggcccaggccgacacggacggctacaactggggctacgacccgttccactac
tcgactcccgagggctcgtacgcggtggacccgaacggtggatcccgcgtctcggagttc
cggcagatggtcggcgcgctgcacggcatggggctgcaggtcgtcctcgaccaggtcttc
aaccacaccacggcctccggccaggccgacacctcggtgctcgaccaggtcgtgccgggc
tactaccagcggctcaatgcggcgggggcggtcgagacctcgacctgctgccagaacgtc
gccaccgagcacgccgtcgcgcagaagctcatggtcgactcgatcgtcacgtgggccaag
gagtacaaggtcgacggcttccggttcgacctcatgggacacgcatccaaggcgaacatg
ctggcgatccggtcggcgctcgacgccctgaccctcaagaaggacggcgtcgacggcaag
gccgtctatctgtacggcgagggatggaacttcggcgaggtcgcgaacaacgcgctgttc
gagcaggccacgcaaggtcagctgggcgggacgggcatcggcacgttcaacgaccggctc
cgtgacgcggtgcacggcggcagcccggtcgacggcggatccacgttcgtgcagggcttc
ggcaccgggctggcgacggacccgaacggcgacgcgatcaacgggtcgggcgcccagcag
ctcgcggccctcgggcacgacaccgacctcgtgaagctcggcctcgccggcaacctgcgg
tcgtactcgttcctgacgtcggacggcacggtgaagcagggctcgcagatcgactacaac
ggccaggccgccggttacgccgaccagcctgacgaggtgatcaactacgtcgacgcccac
gacaacgagacgctgtacgacctgtcggtgttcaagctgccgcgtggcacgtcgatggcc
gaccgcgtgcggatgaacacgctgcagctggcgaccgtcacgctgtcgcagacgccgtcg
ttctggcaggccggcacggagctcctgcgctcgaagtcgctcgaccgcaacagctacaac
tcgggcgactggttcaaccgcatcgactggaccggaaagcagaacacgttcggctccggt
ctgccgcccgccgccgacaacagcggcaaatggtcgatcatggcgccgctgctcgccgac
ccgacgctgaagccgaaggcggccgacatggccgccgccgacgccgccgcgatggacctg
ctgaaggtgcgctcgcaggtgggcctcctgcggctcggctccgccgatctgatctcgcag
aaggtgtcgttcccgaacggcggcgcgcaggcgacgccgggagtcctcgtgatgctcgtc
gacgacgaggccggtgccgacgtcgacccggcgctggatggcgcgctcgtcgtcttcaac
gcgtcgccccaggcgaccacgcagacgatcggctccctcaccgggcgcgacttccggctc
gtcgccgcccaggcgaacggttcggatgcggttgtgaggacgacgacgtgggacaccgcg
accggtacggtcaccgtccccgctcgcagcgtcgcggtgctcgtgcagaaggaggcgccg
ctgcggggcagcctgcgctga
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