Mycolicibacterium rhodesiae: MycrhN_3724
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Entry
MycrhN_3724 CDS
T01685
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MycrhN_3724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrh03019
]
MycrhN_3724
03009 Ribosome biogenesis [BR:
mrh03009
]
MycrhN_3724
Enzymes [BR:
mrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MycrhN_3724
Messenger RNA biogenesis [BR:
mrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MycrhN_3724
Ribosome biogenesis [BR:
mrh03009
]
Prokaryotic type
rRNA helicases
MycrhN_3724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
AAA_19
UvrA_inter
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AEV74242
UniProt:
G8RVJ5
LinkDB
All DBs
Position
3722806..3724494
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AA seq
562 aa
AA seq
DB search
MTTSDPDENRAELTFDDLQIHPSVLQAVKEVGYESPSAIQAATIPAMLKGSDVVGLAQTG
TGKTAAFAIPILSKIDTNSRTTQALVLAPTRELALQVAEAFSRYGAHLHVNVLPVYGGSS
YGPQLAGLKRGAQIVVGTPGRVIDHLEKGTLDVSHLDYMVLDEADEMLQMGFAEDVERIL
ADTPEYKQVALFSATMPPAIKKITSKYLHGPVEVTVKSKTQTAENITQRYIQVSYPRKMD
ALTRLLEVEQGDAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQAVRERTINSLKDG
SLDILVATDVAARGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRER
HLLKSIERVTRQKLVEIELPSVDDVNANRVAKFRDSITEALAAPGIELFRQLIEGYERDH
DVPLADIAAALALQSRDGEEFLMTEPPPEKRRERPDREPRNEGPRKPRERRGDFATYRIS
VGKRHKVMPGAIVGAIANEGGLHRSDFGHISIRPDHSLVELPAKLSHDTLKALEKTRIQG
ILINLQPDRPPRKGGKTGHKSK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctccgacccggacgagaaccgggcagaactcacctttgacgacctgcagatt
cacccttcggtgctgcaggccgtcaaagaggtcggctatgagtcgccgtccgccatccag
gccgccacgattccggccatgctcaagggttcggacgtggtcggcctggcgcagacgggc
accggcaagaccgcggcgttcgcgatcccgatcctgtcgaagatcgacaccaacagccgg
accacccaggcgctggtgctggcgccgacgcgcgaactcgcactgcaggtcgccgaggcg
ttcagccgctacggcgcgcacttgcacgtgaacgttctgcccgtctacggcggctcgtca
tacggaccccagctcgccgggctcaagcgcggagcgcagatcgtcgtcggcacacccggg
cgcgtgatcgatcatctggagaagggcacgctcgacgtctcgcacctcgactacatggtg
ctcgacgaggccgacgagatgctgcagatgggcttcgccgaggatgtcgaacgcatcctc
gccgacaccccggagtacaagcaggtcgcgctgttctcggcgaccatgccgccggccatc
aagaagatcacatcgaaatacctgcacggtcccgtcgaggtgacggtcaagtccaagact
cagaccgccgagaacatcacccagcgctacatccaggtgtcctacccccgcaagatggac
gcgctgacccggttgctcgaggtcgaacagggcgacgcgatgatcgtgttcgtccgcacc
aagcaggccaccgaggaggtcgccgaaaagctgcgcgcccgaggcttttccgcggcagcc
atcaacggtgacatcccacaggccgtccgcgagcgcacgatcaactcgctcaaggacggc
agcctcgacattctggtggccaccgacgtggcagcgcgcggcctcgacgtcgaacgcata
tcgcacgtggtcaatttcgacatcccgcacgacccggagtcctacgtgcaccgcatcggg
cgcaccggccgggcgggccgatcggggaccgcgctgctgttcgtcacgccgcgggaacgt
catctgctcaagtccatcgagcgggtcaccaggcagaagctcgtcgaaatcgagttgccc
tcagtcgacgacgtcaacgccaaccgcgtcgcgaagttccgcgactcgatcaccgaggcg
ctcgctgcgccgggaatcgagttgttccgccagctgatcgagggctacgaacgcgatcac
gacgtgccgctcgccgatatcgccgcggcgctggcattgcagagccgcgacggcgaagag
ttcttgatgaccgaaccgccgccggagaagcgtcgcgaacgacccgaccgggaaccgcgc
aacgagggtccgcgcaaaccacgcgaacgacgcggcgacttcgccacctatcgcatctcg
gtgggcaagcggcacaaggtgatgcccggcgcgatcgtcggcgccatcgccaacgagggc
ggcttgcaccgcagcgacttcgggcacatctcgatccggcccgaccactcgctggtggag
ttgcccgccaagctgtcccacgacaccttgaaagcccttgagaaaacccgcattcagggc
attctgatcaacctgcaacccgaccgtccgccacgaaagggcgggaagaccggccacaaa
tccaaatga
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