Marinomonas rhizomae: KDW99_10550
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Entry
KDW99_10550 CDS
T08610
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrhi03009
]
KDW99_10550 (rluC)
Enzymes [BR:
mrhi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
KDW99_10550 (rluC)
Ribosome biogenesis [BR:
mrhi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KDW99_10550 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Motif
Other DBs
NCBI-ProteinID:
UTV97750
LinkDB
All DBs
Position
complement(2222001..2222972)
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AA seq
323 aa
AA seq
DB search
MSDSELKSAERPAVRYVTIDDNNTGQRIDNFLVTFLKGVPKGKIYNLLRKGEIRVNKKRT
KPDYRLQNEDVVRIAPIVLAPESDKPVLSDRLKSEIESRIVYEDKGLIVVNKPSGLAVHG
GSGLSFGLVEVIRQMRPLEKFIELVHRLDRDTSGLIMIAKKRAVLKELHTALREKEGVQK
TYLALVYGSWPKRKLQVNAPLLKNELKSGERVVKVHTDGKESLTRFKLVRQFEGYSLVEC
EPVTGRTHQIRVHTLHAGYPIVGDDKYSPAESLKETKALGFKRLCLHATRLDIMLNGERM
LFEAPLDKEWQALMNDSLTGIFP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagaactaaaatcagcagagcgtccagcggttcgttacgtcactattgac
gacaataatacgggtcagcgaattgataattttttggttacctttttaaagggtgttccg
aaaggtaagatttacaacttacttaggaaaggtgaaatacgcgttaataagaagcgaact
aagcctgattaccgccttcaaaatgaagatgttgtgcgtattgcgccgatagtacttgca
ccagaatcagacaagccagttttgtctgatcgtttgaaaagcgagatagaatctcgcatt
gtctatgaagataaagggttgatcgttgttaacaagccgtcaggcttagccgttcatggt
ggcagtggcttgagcttcggcttggttgaagttattcgccaaatgcggccgttagagaag
tttattgagcttgttcatcgactcgatcgcgatacatcgggtcttatcatgatcgctaaa
aaacgtgcagtactaaaagagctgcatacggcgttacgtgaaaaagaaggtgtgcaaaaa
acatatttggctttggtttatggcagctggcctaagcgaaaattgcaagttaatgcgcct
ttattaaagaatgaactcaaatctggcgaacgtgtggtgaaggttcacacagacggtaaa
gaaagtttaactcgctttaaattagttcgtcagtttgaaggctatagtttggtcgagtgt
gagccagtaacagggcgtacgcatcagattcgcgttcatacgctgcatgcgggctatccg
attgttggtgatgataaatactcgccagctgaatccttaaaagaaacaaaagcccttggc
tttaagcgcttatgtcttcatgcgacacgattagacattatgttgaatggggagcgtatg
ctgtttgaggcgccgctggataaagagtggcaagctttgatgaatgacagtttgaccgga
attttcccatag
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