Methylomonas rapida: NM686_000900
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Entry
NM686_000900 CDS
T08781
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
mrp
Methylomonas rapida
Pathway
mrp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NM686_000900 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mrp02000
]
NM686_000900 (lptF)
Transporters [BR:
mrp02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
NM686_000900 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Colicin_V
Motif
Other DBs
NCBI-ProteinID:
WAR45097
LinkDB
All DBs
Position
complement(192740..193876)
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AA seq
378 aa
AA seq
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MNTDRAIPGAGRPIRLLTVLDKMIIKDLFKTVVSVLTVLVVIIVSRKFIKVLAQAIEGNI
AGDTVMALLGLRIVIATTTFLPAALFMAILMVLGRMHREQEMAAISSAGGGVFTIYRAVF
WLVLPLSACAAGLSMYATPWAEAQTQKLMHQDKENADIRGISAGRFSEYSGGELIFYTEN
VDVSGKMQHVFVQNKQGEKLGVVNARNGRLEYLPGGLYLILEHGERVQGIPGQKDYTLEA
FQEYAVLVEKKTIAFVPPTEGLPTKQIWGSADTREIALLQDRLNAPMGTLLLAFLAVPLA
KSAPRGGVYGSMLIAFGIYFAYANLQRVNHSWVISGKVPTWLGYFWVEALLLTVGLIMLA
RLYSWKWIVLKLTGKVNP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
ttgaacactgatcgagcaatacctggcgccggccgaccgattcggctgttgacggtgttg
gacaagatgatcatcaaggatctgtttaaaaccgtcgtctcggtcttgacggtactggtc
gtgatcatcgtcagccgtaaattcatcaaggtcctcgcgcaagccatcgaaggcaatatc
gccggcgacaccgtcatggccttgctgggtcttagaatcgtcatcgccacgaccacgttt
ttaccggcggccctgttcatggccattttgatggtattgggtcgtatgcaccgggaacag
gagatggcggccatttcatcggccggcggcggcgtttttaccatctaccgcgcggtattc
tggctggtgttgcccttgagcgcctgcgcggccggcttgtccatgtacgccacgccgtgg
gcggaagcccagacgcaaaaactgatgcatcaagacaaggaaaatgccgatattcgcggc
atttccgccggccgtttcagcgaatacagcggcggcgaattgattttttataccgagaac
gtcgatgtgtccggcaagatgcagcacgttttcgtgcaaaacaaacaaggcgaaaaactg
ggggttgtgaatgcccgaaatggccgcctggaatatttgccgggcggtttgtatttgatt
cttgaacatggcgaacgggtacagggcatacccggccagaaggattacaccctcgaagcc
tttcaagaatatgcggttttagtggagaaaaagaccatcgcgttcgtacctcccacagaa
ggcctgccaaccaaacaaatttggggctcggccgatacacgggaaattgcgctgctgcaa
gatcgcttgaacgcgccgatgggtacattgctgctggcctttttggcggtaccgctggcc
aagtccgccccgcgcggaggtgtctacggcagcatgttgattgcattcggcatctatttc
gcatacgccaacttacagcgcgtcaaccacagctgggtcatcagcggcaaggtccctacc
tggcttggctatttctgggtggaagccttattgctcaccgtgggcttgatcatgctcgcg
cgcttgtacagctggaaatggatagtcctcaaattgaccggcaaggtaaacccgtga
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