Methylomonas rapida: NM686_005365
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Entry
NM686_005365 CDS
T08781
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K08692
malate-CoA ligase subunit alpha [EC:
6.2.1.9
]
Organism
mrp
Methylomonas rapida
Pathway
mrp00630
Glyoxylate and dicarboxylate metabolism
mrp00680
Methane metabolism
mrp01100
Metabolic pathways
mrp01120
Microbial metabolism in diverse environments
mrp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NM686_005365 (sucD)
09102 Energy metabolism
00680 Methane metabolism
NM686_005365 (sucD)
Enzymes [BR:
mrp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.9 malate---CoA ligase
NM686_005365 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
DapB_N
GFO_IDH_MocA
PPV_E1_C
Motif
Other DBs
NCBI-ProteinID:
WAR45948
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All DBs
Position
1151997..1152884
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AA seq
295 aa
AA seq
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MAIFIDKDTRIIVQGFTGKIGTFHAQEMIEYGSNVVGGITPGKGGQKHLERPVFNTVKEA
VEQVGAEASIVFVPPAYAADSIMEAAEAGIKYCVCITDGIPTQDMMKVKIFLSKFPKESR
MVLTGPNCAGTISPGKSMLGIMPGHIYMPGNVGIVGRSGTLGYEAADQMKALGIGVSTSV
GIGGDPINGSSHRDILEKFEQDPETKVVMMIGEIGGPQEVEAGVFANEHMSKPVVAYIAG
LTAPKGRRMGHAGAIISASGESAAEKVERLQELGVTIAPTPAAMGETVAKVLAKL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttttatcgataaagacacccgcatcatcgttcaaggttttaccggcaaaatc
ggtacctttcacgcccaggaaatgatcgaatacggctccaacgtggtcggcggcatcacg
ccgggcaaaggtggacaaaaacatctggagcgtccggtgttcaacaccgtgaaagaagcg
gtcgagcaagtcggcgccgaagccagcatcgtgttcgtgccgcccgcttatgcagccgat
tcgatcatggaagcggccgaagccggcatcaaatactgcgtttgcatcaccgacggtatt
ccaacccaggacatgatgaaggtcaaaatcttcctgagcaaattcccgaaagaaagccgc
atggtcctgaccggcccaaattgcgccggcaccatcagccccggcaaatccatgctgggc
atcatgccgggccatatctacatgccgggtaatgtcggcatcgtcggccgttccgggacc
ttgggctatgaagctgccgaccaaatgaaagcattgggtatcggcgtctcgacttcggtc
ggtatcggcggcgacccgatcaacggcagttcgcaccgtgacattctggaaaaattcgag
caagacccggaaaccaaggtcgtgatgatgatcggcgaaatcggcggcccgcaagaagtc
gaagccggcgtcttcgccaatgagcacatgagcaaaccggtcgtggcttacatcgccggt
ttgaccgcgccaaaaggccgccgcatgggccatgccggggcgatcatttcggcatccggc
gaatcggcggcagaaaaagtcgagcgtttgcaagagctgggcgtcaccatcgcaccgact
ccggcggcgatgggcgagacggtcgccaaggtactggccaagctttaa
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