Methylomonas rapida: NM686_013910
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Entry
NM686_013910 CDS
T08781
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mrp
Methylomonas rapida
Pathway
mrp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NM686_013910 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrp03400
]
NM686_013910 (uvrB)
DNA repair and recombination proteins [BR:
mrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NM686_013910 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NM686_013910 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_33
DUF87
Kinesin
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WAR47065
LinkDB
All DBs
Position
2973525..2975531
Genome browser
AA seq
668 aa
AA seq
DB search
MHKPFKIQSRYQPAGDQPAAIKQLVEGINDGEVHQTLLGVTGSGKTFTVANVIQQTQRPA
MILAPNKTLAAQLYGEMKEFFPDNSVEYFVSYYDYYQPEAYIPASDTFIDKDASLNQHIE
QMRLSATKALLERRDTVVVATVSAIYGLGEPESYFQMVLHLVRGDMIKQRDILRRLAEMQ
YTRNDTELRRATYRVRGEVIDVFPAESEEQALRIELFDDEIERLSMFDPLTGEVTQRLAR
FTIYPKSHYVTPREQLLIAVEKIKLELAERLEHLRDNHKLVEAQRLEQRTLFDIEMILEV
GYCSGIENYSRHLSNRGPGESPPTMFDYLPKDALVIIDESHVTVPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPLRFEEFEQICGQRIYVSATPGPYEKEHSGAVVEQVVRPTGLVDP
VVEVRPATTQVDDLLSEINKRVAAKERVLVTTLTKRMSEDLTDYLLEHNVKVRYLHSDIE
TVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVGILDADKEGFLRSITSLIQTIGR
AARNANGKVILYGDRITRSMQQAIDETERRRAKQIAFNLKNNITPKTVFKSVTDILELSI
PGAGGSIASAKAKVAEAAVEYKAMTPKQAAKTLKQLEEKMYQHAKNLEFEEAARVRDQIK
LLQAEMVV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcataaacctttcaaaatccagagtcgctatcaaccggccggcgatcagcccgcagcc
atcaaacaattggtggagggcatcaatgacggcgaagtgcaccagaccctgctcggcgtc
acggggtccggaaagacctttaccgtcgccaatgtgattcagcaaacccagcgccccgcc
atgatcctggcgcccaacaagacgctggccgcccagctgtacggcgagatgaaggagttt
tttccggataacagcgtcgagtatttcgtgtcctactacgattattaccaaccggaagcc
tatattccggcctctgacaccttcatcgacaaggacgcctcgttgaaccaacacatcgag
caaatgcgcctgtccgcgaccaaggccctgctggagcggcgcgataccgtggtggtcgcc
accgtatcggcgatttatggcctgggcgagccggaatcctatttccagatggtgctgcat
ttggtgcgcggcgacatgatcaagcagcgcgatattctgcgccgactggccgagatgcaa
tacacccgcaacgacacggaactgcgccgcgccacttaccgggtgcgcggcgaagtcatc
gacgtgtttccggccgaatcggaagaacaggccctgcgcatcgagttgttcgacgacgaa
atcgagcggctgtcgatgttcgacccgttgaccggcgaagtcacccagcgcctagcccgt
ttcacgatttatccgaaaagccattacgtgacgccgcgcgaacagctattgatcgccgtc
gagaaaatcaagctcgaactggctgaacgcctggagcatttacgcgacaaccacaaattg
gtcgaagcccagcgcctggagcagcgcaccctgttcgacatcgagatgatactggaagtg
ggttattgctccggcatcgaaaactattcgcggcatctgtccaaccgcggcccaggtgaa
tcgccgccgaccatgttcgattatttgcccaaggacgccttggtcatcatcgacgaaagt
cacgtcacggtgccgcagatcggcgcgatgtacaagggcgaccgctcgcgcaaggaaacc
ctggtggagtacggcttccgtttgccgtcggcattggacaaccggcccttgcgtttcgag
gaattcgagcaaatctgcggccagcgcatttacgtgtcggcgacgcccggcccgtacgaa
aaagaacattccggcgcggtggtcgagcaagtggtacgcccgaccggtctggtcgatcca
gtggtcgaagtacggccggcaacgacacaggtcgatgacctgctgtccgaaatcaataaa
cgcgtcgcggccaaggaaagggtgctggttacgaccttgaccaagcgcatgtccgaggat
ttgaccgactatctgctggagcataacgtcaaggtgcgctacctgcattcggacatcgaa
accgtcgagcgggtcgagatcatccgcgacctgcgcctcggcgtgttcgacgtactggtc
ggcatcaacctgctgcgtgaaggtctggacatcccggaagtatcgctggtgggcatactg
gatgccgacaaggaaggctttttgcgttcgatcacctcattgatccagaccataggccgc
gccgcccgcaacgccaacggcaaggtgattttatacggcgacaggatcacccgctcgatg
cagcaagccatcgacgaaaccgagcgccgccgggcgaaacagatcgcgttcaacctgaaa
aacaatatcacgcccaaaaccgtgttcaaatcggtcacggacatcctggaactatccatc
cccggcgccggcggctcgattgccagcgccaaggccaaggtcgccgaagccgcggtcgaa
tacaaggccatgacaccgaagcaggctgccaaaaccctaaaacaactggaagaaaaaatg
taccagcacgcgaaaaatctcgaattcgaagaagcggcgcgtgtcagggatcagataaaa
ttattgcaggcggaaatggtggtttaa
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integrated database retrieval system
