Moniliophthora roreri: Moror_1402
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Entry
Moror_1402 CDS
T03137
Name
(GenBank) 5 -3 exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mrr
Moniliophthora roreri
Pathway
mrr03008
Ribosome biogenesis in eukaryotes
mrr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Moror_1402
09123 Folding, sorting and degradation
03018 RNA degradation
Moror_1402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrr03021
]
Moror_1402
03019 Messenger RNA biogenesis [BR:
mrr03019
]
Moror_1402
03009 Ribosome biogenesis [BR:
mrr03009
]
Moror_1402
03016 Transfer RNA biogenesis [BR:
mrr03016
]
Moror_1402
Transcription machinery [BR:
mrr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Moror_1402
Messenger RNA biogenesis [BR:
mrr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
Moror_1402
Ribosome biogenesis [BR:
mrr03009
]
Eukaryotic type
Pre-60S particles
RNases
Moror_1402
Transfer RNA biogenesis [BR:
mrr03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
Moror_1402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-ProteinID:
ESK93704
UniProt:
V2YPU2
LinkDB
All DBs
AA seq
1168 aa
AA seq
DB search
MGVPALFRWLSKKYPKIIYPVVEDEEIKVEDENDELVTIPTNMADPNPNGTEFDCLYLDM
NGIVHPCTHPEGKPAPETEEDMMVEVFKYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQR
SRRFRAAQEAKEKEEARLESVRLWEEMGKTISEEEKNKKAWDSNAITPGTPFMDLLAASL
RYWVVQKMNSDPGWKNLQVIISDASVPGEGEHKIMDFIRRQRTNPGHDPNTKHVIYGLDA
DLIMLALATHEPYFRVLREDVFSDSSNMACRMCGQEGHYAAQCTATPAEVQDRAKKKVTE
RKPFIFLDVSILREYLEAELNVPQESFPFNLEQAIDDWVLLIFFVGNDFLPHLPSLEIRE
GAIDTLLRIWKTELSRMGGYLTNHGRLELARVQIILEGLAKREDDIFKRRREAEERQEQN
AKRRKLEKDGTVESISAGAPSRSSSNHDFAAKADSIGLGAPATEESIKHLPSAQQALAGS
NHDVVANRRAIRMANMSAAEVLKAELAGLMPVKKSATITKKPDLSLPAKPESSLPLPAAS
LDAIRMSVDGPPPTAVPATTTTMSTTEDADFDIPGFGGSMTSVATTSVVTSAVPSTTSTQ
SPTQGSMKVDDIPGAAANADVGDFNDSANVDDSIMGTKRKYEEGPGEVEGDETLEAEEEE
PPADGPHDKSALEYKVNPDGTVTQEDTVKLWEPGYRERYYQQKFGVEYTDKEFRKKLTQS
YIEGMSWVLCYYYQGTPSWQWYYPYHFAPFAADFEEVDKMNIHFKIGQPFKPYEQLMGVF
PAASRKHIPETFHHLMTEEESPIIDFYPTTFQIDMNGKKMAWQGVALLPFIDEKRLLGSM
REPYNKLTDDEIRRNTWGNNVIFAADEHPVHPFYEKLYGKGKPKDPVPLDPKLSQGISGT
VLPNPDCLPGSTYFSPFTQVNLPDIRNDRSLSVQYFFPKQLSPHHSVLLPGVRRPPRILS
QEDIENSRRGGRGRGRGGGGGDWGGGRGGYNNDRSRGSSGNDPFHSRPSNYPPSGYGNDR
NRGYQQDNYSSRGGNHSYGGGGYGRGGGGSDGRSRPPNNQGYGGQNSGYSRGPPGGRGGG
PSNNPYGSYGANGGGYGGYGGNSAGYGGYGGNTSGYGYGRGNPASYGGGAYGNGGSQQAG
QVGNYGVYGGGGRGGGYNQSSRGRGRGW
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttccagcactattccgctggttgagtaaaaaataccctaaaatcatctaccca
gtggtagaggatgaagaaatcaaggtcgaagatgaaaatgacgaactagtcacaattcct
acgaacatggcggaccctaatcctaatggaacggaatttgattgtctgtatcttgatatg
aatggaattgttcacccatgtactcacccagagggcaagccagcgcccgaaacagaagaa
gatatgatggtggaagttttcaagtacactgaacgggtggtaaacatggtcagaccaagg
aaactcttatttatggctatcgacggtgttgctccccgcgctaaaatgaatcagcaaagg
tcgagacgttttcgagctgcccaggaggcgaaggaaaaggaagaagctagattggagtcg
gtacgactctgggaagagatggggaagaccatctcagaagaggagaagaacaaaaaggcg
tgggactcgaatgctatcactcctggaacaccattcatggatttacttgccgcctcattg
cgatattgggtggtgcagaagatgaactctgatcccggttggaagaatctccaagtaatt
atttctgatgcgagtgttcctggagaaggagaacataagatcatggacttcatcaggagg
cagaggactaatcctggacatgacccgaatacgaagcatgtcatctatggtttagacgct
gatcttatcatgcttgcattggccacgcatgaaccctacttcagagtactacgagaggac
gtattctcagacagctccaacatggcatgtcgtatgtgtggacaagaaggtcactacgca
gcccaatgtacagccacaccagcagaggtacaagaccgagcgaaaaagaaagtcacagaa
agaaaaccattcatatttctcgacgtctcgattctacgagaatacttggaagcggaactg
aatgtaccccaagaatcattcccgttcaatctggaacaagccatagatgattgggtctta
ctcattttctttgttggaaatgattttttgcctcacttaccttcgcttgagatccgggag
ggtgcgattgatacgctgttgaggatatggaagacggagctgtcgcgaatgggcggctat
ttgacgaaccacggccgccttgagttggccagagtgcagatcatccttgagggtcttgcg
aaaagagaagatgatatatttaagaggcgacgtgaagccgaagagcgtcaagagcagaac
gccaaacgacgcaagctggagaaggacggcactgtcgagtccatctccgctggtgcacca
tcccgatcatcatccaaccacgatttcgcggccaaagccgattcaataggtctcggtgca
cctgcgacagaggaatcaatcaaacaccttcccagtgcacagcaagcgctcgcaggttcc
aaccatgatgttgtcgccaatagacgtgcaatcagaatggcgaacatgagcgctgcagag
gtgctgaaagccgaacttgcaggcctgatgcctgtcaaaaagtcggccacaataacgaag
aagccggacttatctctacccgccaaaccagagtcatccttgcccctacctgctgcctcc
cttgatgcaattcggatgagtgtggacggaccaccaccgacagcggtgcctgccactacg
accaccatgtctacgaccgaagatgcggattttgatatacctggatttggcggcagtatg
acaagtgtcgctaccacatctgtggttacgagcgcagttccatccacgacctcgacacaa
tctcccacacaaggctccatgaaggtcgatgatataccaggtgcagctgccaatgcagac
gtcggtgatttcaacgactctgctaatgtcgacgacagtattatgggtactaagcgtaag
tatgaagagggccctggagaagtcgagggggacgagacattggaggctgaagaggaggag
ccacctgcagatggtcctcacgacaaatctgccttggaatacaaggtaaacccggatgga
acagtcacgcaggaggatacagtaaagttgtgggagcctggttatagagagcgatactac
cagcagaagttcggcgttgagtataccgacaaggaattcagaaagaaattgacgcagagc
tatattgaaggcatgtcttgggtgttgtgttattattatcaagggacaccttcgtggcag
tggtactacccctatcattttgctccgtttgcggccgactttgaagaagtcgataagatg
aatattcatttcaagatcggtcaaccattcaagccatacgaacagctcatgggagtcttc
cctgcagcaagtcgaaagcacattccggagacattccatcacctgatgacagaagaagag
tcacctataatcgacttttaccctactacgttccaaatagacatgaacgggaagaagatg
gcatggcaaggtgttgctcttctaccgttcattgacgagaaacgccttttgggctctatg
agggaaccatacaataagctcacagacgatgagatacggcgcaacacatggggcaacaat
gtcatctttgctgcagacgagcatccagtgcatccattctacgaaaagctttatggaaag
gggaagccaaaagatcctgttccacttgacccgaaactgagtcaaggtatcagtggtact
gtcttaccaaaccccgactgtctaccaggctctacctactttagccctttcacgcaagtg
aacctacccgatatcagaaacgaccgatcactctctgtgcaatacttcttccctaagcag
ctatctcctcaccactccgtccttctaccaggtgtgaggcgaccaccccgcatcctttcg
caagaggatatcgaaaattcgaggcgaggtggacgtgggcgcgggcgtggaggtggtgga
ggcgattggggaggtggtcgcggtggatacaacaacgaccgatccaggggaagcagtggt
aatgaccccttccattcgagaccatcgaactacccaccgtctggatatggtaatgataga
aacagaggataccagcaagataactactcttcccggggtggcaatcattcgtatggcgga
ggtggatatggacgaggcggaggcggaagcgacggtcgtagtaggccgccaaataaccaa
ggttacggcggtcagaatagtgggtacagtcgaggtccgccagggggaagaggcggcggt
ccaagtaataacccatatggaagctatggtgcgaacggaggaggatatggcgggtacgga
ggaaactcggcaggttatggtggctatggcggaaacactagcggatatgggtatggtaga
gggaatcccgccagttatggcggcggagcctacggaaatggcgggtcacagcaagctggt
caggtaggaaactatggtgtttacggtggcggcggtcgaggcggaggttacaatcaatct
tcgaggggcagaggcaggggatggtag
DBGET
integrated database retrieval system
