KEGG   Malassezia restricta: MRET_3854
Entry
MRET_3854         CDS       T06113                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mrt  Malassezia restricta
Pathway
mrt03030  DNA replication
mrt03410  Base excision repair
mrt03420  Nucleotide excision repair
mrt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MRET_3854
   03410 Base excision repair
    MRET_3854
   03420 Nucleotide excision repair
    MRET_3854
   03430 Mismatch repair
    MRET_3854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mrt03032]
    MRET_3854
   03400 DNA repair and recombination proteins [BR:mrt03400]
    MRET_3854
Enzymes [BR:mrt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MRET_3854
    6.5.1.6  DNA ligase (ATP or NAD+)
     MRET_3854
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MRET_3854
DNA replication proteins [BR:mrt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MRET_3854
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MRET_3854
DNA repair and recombination proteins [BR:mrt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MRET_3854
   NER (nucleotide excision repair)
    Other NER factors
     MRET_3854
   MMR (mismatch excision repair)
    Other MMR factors
     MRET_3854
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 38740620
NCBI-ProteinID: XP_027486237
LinkDB
Position
VII:complement(131419..133446)
AA seq 675 aa
MARRQATLDALFGGQPEAKRVKTEAPAEKKSELPPKVSDGVPIAYAVLVDTFTRVEATTK
RLEILELVTNVFMRIIYESSEGKPLVSARDNLLHAVYLCINRLCPDYEGLELGIGEGLLI
KAIAQSTGREVVRIKKDFESLGDLGLVARASKKHQPTMFRAQALTLSYVFHQLRLIAAAS
GAKSQDKKLGIIKRLLAACSDDEAKYLIRSLEGKLRIGLAEKTVLIAVAQAVMLVMRGEA
CYTAELAPSLEHGIHTVKAVFSELPSYDVLIPALLAHGVEHLHEHVTLTPGIPLKPMLAK
PTKAIGEVLDRFEAQAFTCEYKYDGERAQVHGFMEDGQLQVRVFSRNSEDMSVKYPDLVV
QIPRCLREGRVRSFVLDAEAVAWQPRGSEPGRLLPFQELSRRKRKDVQADDVRVAVKVFA
FDLLYLNGASLLQEALARRRSLLWECFAPVEDEFDFATSKDCTTTEEIQAFLDESVAHGC
EGLMVKMLTGGDATYEPSRRSINWLKLKKDYLSGTGDSLDLTVIGAYYGRGKRTNVYGAF
LLACYDEDSETYQSVCKIGTGFSEADLDAHYTTLKALEISAAKSYYDLGEAKPDVFFEAR
IVWEVLAADLSLSPVYTAARGAIDARGVSLRFPRFVRIRDDKTPDMSTTPEQVASMYRAQ
VATSARIDDDADEFW
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggcgcgtcggcaggccacgctcgatgcgctctttggcggccagcctgaagccaagcgc
gtaaagacagaggcgccggcagagaagaagagtgagcttccgccaaaggtgtcagatggc
gtgccgatcgcttatgcggtgctggtggacacgtttacgcgcgtcgaggctacgaccaag
cgcctcgagattctagagctcgtgacgaatgtgttcatgcggatcatctacgaaagcagt
gagggcaagcctctggtttctgcgcgggacaatctcttgcatgctgtgtacttgtgcatc
aatcgcttgtgccccgattatgaaggtcttgagctggggatcggcgaagggctcttgatc
aaggccatcgctcagagcacaggccgcgaagtcgtgcggattaagaaggatttcgagagt
ctgggtgacctgggccttgtggcgcgtgcatcgaaaaagcaccagccgaccatgtttcgc
gcgcaggctttgacgttgtcgtacgtgtttcaccagctgcgtctgattgcggcggcgtcg
ggcgccaagtcgcaggacaagaagctcggcatcattaagcggctgctagcggcatgcagt
gatgatgaggccaagtacttgatccgcagtctggagggcaagttgcggattggcctcgca
gaaaagacggtgctcatagccgtggcgcaggcagtgatgctggtgatgcggggcgaggca
tgctacacggccgagctggctccatcgctggagcatggtatacataccgtcaaggccgtg
ttcagtgagttgccgtcgtacgatgtgctgatccctgccttgctggcgcatggtgtggag
catcttcacgagcacgttaccttgacgccgggcattccgctcaagcccatgctggcgaag
ccgaccaaggcgattggcgaggtgctggaccggtttgaggcgcaggcctttacgtgtgag
tacaagtacgatggcgagcgtgcgcaggtgcatggatttatggaggatggccagcttcag
gtgcgtgtgtttagccgcaattcggaggacatgagcgtcaagtaccctgaccttgtcgtg
cagataccccgttgcctccgggagggccgtgtgcgcagttttgtgctggatgctgaggct
gtggcgtggcagccgcgcggctcggagccggggcggctgctgccgttccaggagctgagt
cggcggaagcgcaaagacgtgcaggcggacgatgtgcgtgtggcggtcaaggtatttgcg
tttgatttgctgtacctgaatggggcgtctctgctgcaggaggccttggcgcggcggcgg
tccctgctgtgggagtgctttgcgcccgtggaggatgagtttgactttgcgacgtcgaag
gactgcacgacgacggaagagatccaggcgttcttggatgagagcgtggcgcatggctgt
gaaggcttgatggtcaagatgctcacgggtggcgatgcgacgtacgagccgagtcgtcgc
tcgatcaactggctgaagctcaagaaggactatttgtcgggcacgggcgacagtcttgat
ctgacggtgattggtgcgtactatggccgcggcaagcgcacgaacgtgtacggagcgttc
cttcttgcatgctatgacgaagacagcgagacgtaccagagcgtgtgcaagattggcacg
ggcttttccgaggcggatcttgatgcgcactataccacgctgaaggcgctggagatctct
gctgcgaagagctactacgacctgggtgaggccaagccggacgtgttttttgaggcgcgc
atcgtgtgggaggtgctggcggcggacctgtcgctgagccccgtctacacagccgcgcgc
ggtgcgatcgatgcgcgtggtgtatcgctgcgctttccgcgtttcgttcggatccgcgac
gacaagacgccggacatgtcgacgacgcccgagcaggtcgcgagcatgtaccgcgcgcag
gtagcgacgtcggcgcggatcgacgacgacgcggacgagttttggtag

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