Methanospirillum sp. J.3.6.1-F.2.7.3: KHC33_02540 Help Entry KHC33_02540       CDS       T07306                                  Name (GenBank) ATP-dependent DNA ligase   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism mrtj  Methanospirillum sp. J.3.6.1-F.2.7.3 Pathway mrtj03030   DNA replication mrtj03410   Base excision repair mrtj03420   Nucleotide excision repair mrtj03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mrtj00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     KHC33_02540    03410 Base excision repair     KHC33_02540    03420 Nucleotide excision repair     KHC33_02540    03430 Mismatch repair     KHC33_02540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mrtj03032]     KHC33_02540    03400 DNA repair and recombination proteins [BR:mrtj03400]     KHC33_02540 Enzymes [BR:mrtj01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      KHC33_02540     6.5.1.6  DNA ligase (ATP or NAD+)      KHC33_02540     6.5.1.7  DNA ligase (ATP, ADP or GTP)      KHC33_02540 DNA replication proteins [BR:mrtj03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     KHC33_02540  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      KHC33_02540 DNA repair and recombination proteins [BR:mrtj03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      KHC33_02540    NER (nucleotide excision repair)     Other NER factors      KHC33_02540    MMR (mismatch excision repair)     Other MMR factors      KHC33_02540 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-ProteinID:  QVV89426 UniProt:  A0A8E7B1P5 LinkDB All DBs Position complement(524200..525846) Genome browser AA seq 548 aa AA seqDB search MLFSEFSDLCKRLEKTSGRLDTIAILAEGIASLSDDDLPHFCRLILGKPFPEWSGKKLGI GPNLLYEAVAYVTGRKREEVIDRLSRVGDAGAAVEDLLSQKSQTSFFTVELTLTDVMAAL VEISGMEGSRSQKEKIRVIQRILSSASPLEGHYITTILLEDFRIGVGEGNLRDAIAQALA VDPSLVEYANQVRNDMGEVSVLARKGEDALRSVRLIPFHPVRMMLARQGTISGVLEEGDP VAVEYKYDGARFQFHKQNGICRMYSRRLEEVTAAMPDVVALLDNALLDDVIVDGEVIAVQ EGHPMPFQTVLRRFRRKHNVAKAADAITLIPNLFDILYYNQEMLIDLPFQERREMLTKVA SQYVTPQLVSDDETEIEAYYHRALDAGHEGVMLKIQRSRYTPGVRGKDWVKIKPEADTLD LVVTGAEWGEGKRAHVFGSFLLSVRSNEKLVPLSRVATGFSDEQLSWLFTTLQDDIIRKN GKMVFFEPRLVFEIGYSEIQKSPNYEGGYALRFPRFIEVREDKDLKEANTAEDVEERYIQ THRPLQTP NT seq 1647 nt NT seq  +upstreamnt  +downstreamnt atgttgttttcggaattttcagatctgtgtaaacgtcttgaaaaaacttcaggaagactg gatactatcgccatacttgctgagggtatagccagcctctctgatgatgacctcccccat ttttgccggcttatcctgggaaaaccattccctgagtggagcgggaaaaaactcgggatc ggcccgaatcttttgtacgaagcagtggcatatgtcacgggaagaaaacgtgaagaggtg attgatcgtctgagtcgggttggagatgctggtgctgcggtagaagatcttctctcccag aaatcacagacatcttttttcacggttgaactgacccttacagatgttatggccgccctt gttgagatatccggaatggaggggagtcgttcccagaaagaaaagatcagggttattcag cgaatactatccagtgcttcacctcttgagggtcattatatcactacaattctcctcgaa gatttccggattggggttggagaaggaaaccttcgtgatgccattgctcaggcactcgcg gtagatccaagccttgttgagtatgcaaaccaggtcagaaatgacatgggagaagtttca gtgttggcacgaaagggagaagatgctcttcgctcagtacggctgatcccgttccatccg gtcaggatgatgcttgcacggcagggaaccatctctggtgttttggaggagggagatccg gttgcggttgagtataaatacgatggagcaaggtttcagtttcacaaacagaacgggatc tgcaggatgtactccaggcggcttgaagaggttacagcagctatgcctgatgtcgtcgca ctcctcgataatgctcttctggatgatgtgatcgttgatggagaagtcattgctgttcag gaaggacaccccatgccatttcagacggtccttcgaaggtttcggagaaaacataatgta gcgaaggcagcggatgccatcacactgattccaaacctctttgatattctctattacaat caggaaatgctcatcgacctgccatttcaggaaagaagggagatgttaacaaaagttgca tctcagtatgtgacaccacaactggtatccgatgatgaaacagagatcgaagcatattat catagagcccttgatgccggacatgaaggagttatgttaaaaatacagagatcgcgatat acacccggtgtcagaggcaaagactgggtaaaaataaaacctgaagcagacacactggac cttgttgtaacgggggctgagtggggagagggaaaacgtgctcatgtctttggatcattt cttctttccgtcaggagtaatgagaaactggttccactaagtcgggttgcaactggtttt tctgatgaacaactgagttggctgtttacaacacttcaagatgatattattcggaaaaat ggaaaaatggtcttctttgaaccacgacttgtctttgagatagggtactcagagattcaa aaaagtcccaattacgaaggtgggtatgctctccgatttcccaggtttattgaagtgaga gaagataaagacctgaaagaagcaaacactgcagaagacgtcgaagaaagatatatacag actcatcgccctctacaaacaccctaa

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