Methanobrevibacter ruminantium: mru_0109
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Entry
mru_0109 CDS
T01166
Symbol
rfbC1
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RfbC1
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru00521
Streptomycin biosynthesis
mru00523
Polyketide sugar unit biosynthesis
mru01100
Metabolic pathways
mru01110
Biosynthesis of secondary metabolites
mru01250
Biosynthesis of nucleotide sugars
Module
mru_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
mru_0109 (rfbC1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
mru_0109 (rfbC1)
Enzymes [BR:
mru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
mru_0109 (rfbC1)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADC45961
UniProt:
D3DYP1
LinkDB
All DBs
Position
215878..216456
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AA seq
192 aa
AA seq
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MGKFNIIKSEIEGVFTVEPTVFEDERGYFMETYNENDFKAEGIDLTFVQDNQSKSSKGVL
RGLHFQYTQPQGKLVRVIKGEVFDVGVDLRKDSPTYGKWMGEILSEENKKQLFIPKGFAH
GFLVLSDEAEFVYKCTDFYKGDDEGGIQWNDPDIGIEWPLGDLKEEDLILSEKDKLLKPM
KDTPTDFYMEDE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtttaatataattaaaagtgaaattgaaggtgtatttacagttgaacctacc
gtttttgaagatgaacggggctactttatggaaacttataatgagaatgactttaaggca
gaggggattgatttaacctttgttcaagacaatcaatcaaagtcatcaaaaggagtactt
agaggcctccatttccaatacacacagccacaaggaaagctggttcgtgtaataaaggga
gaagtcttcgatgtgggagtggatcttagaaaagactcacctacatatggaaaatggatg
ggggaaatactctctgaagaaaacaaaaaacagttatttataccaaaaggatttgcccat
ggctttttagtattatcagatgaagcagaattcgtttacaagtgtacagacttctataaa
ggagatgatgagggaggaatccaatggaacgaccctgatataggaatcgaatggccattg
ggagaccttaaggaagaggatctgattctatctgaaaaggacaagctattgaagccaatg
aaagacactccaactgatttctatatggaagatgaatga
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