Mauremys reevesii (Reeves's turtle): 120375010
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Entry
120375010 CDS
T07797
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03013
Nucleocytoplasmic transport
mrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120375010 (UPF3A)
03015 mRNA surveillance pathway
120375010 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120375010 (UPF3A)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120375010 (UPF3A)
mRNA cycle factors
P-body specific factors
120375010 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
120375010
NCBI-ProteinID:
XP_039351478
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All DBs
Position
LG1:115219278..115282661
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AA seq
573 aa
AA seq
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MRSEREAGPGLARGGGREKRPMETPLRRESPRRDPETPPPPPGPPPPPPPHPALGRQREE
KRAALSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPD
DILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKSGSIEDDPEYRKFLE
SYCADEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRR
ELEKKRLREEEKRKRREEERRKRKEAEKQKKIAEKEIRIKLLKKPEKGDDLPSETNKEKG
EEADIEESKWEKSPGSGSIKSKPLEGSPKELKEKSQNDSDKEQMDLERRFREKDLERQRY
RLDDGRKHRAHYEFDKFVRRNEEELKWGKGYSQDRGKKGNHNYSFTVEAVDKLGKEDKCD
DMASKKERIRNKDRPAMQLYQPGARIRTHTGSTSKIYDCSGKSSEDACDRKYEFLQRRTV
TFLMGGPGLFAELLEGGQKIATMTSISERWKRLFHLLQNLLHPDQPAELLWQPTCPPQSM
WKSCFASFGSLSLNFNTVSHMKNCITKAKRSHL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggagcgggaggccgggccggggctggcgcgcgggggcggccgggagaagcgg
cccatggagaccccgctccggcgggagtcaccgcgccgggaccccgagacccccccgccg
cccccgggcccgccgccgccgccgccgcctcacccggccctgggcaggcagcgggaggag
aagagagcggcgctgagcaaggtagttattcgccggcttcctcctagtctaaccaaggag
caactggaagagcagctacatccgctacctgcccacgattattttgaattttgcactgct
gatcccagtctttatcctcatctctactcaagagcatacattaattttagaaatcctgat
gacatccttctttttagagatcgctttgatggctatgtcttcattgataataaaggtttg
gaatatcctgctgtggtagagtttgctccattccaaaagatttcaaaaaagaagcttaag
aaaaaagatgcaaaatctgggagcattgaggatgatccagaatatagaaaatttttagaa
agttactgtgccgatgaagagaaaatctgtgctaatcctgagactctgttgggagagatt
gaggcaaaaacaagggaacttattgctagaagaacaacacctcttttggaatatattaaa
aatagaaaattagaaaagcagaggatacgagaagaaaaaagggaagaacgaaggaggaga
gaattagaaaagaaacgtctgcgagaggaagagaaaagaaagcgcagagaagaagaaaga
cgtaaaagaaaagaagcagagaagcaaaagaaaattgctgaaaaagaaataaggatcaag
cttcttaaaaagcctgaaaagggagatgacctgcccagtgaaacgaacaaggaaaaagga
gaagaagctgatattgaagaaagcaaatgggaaaaatcacctggatccgggagtataaaa
tccaagccattggagggctcaccaaaggaacttaaggaaaagtcacaaaatgatagtgat
aaagagcaaatggatttggagagaagatttcgagaaaaagaccttgaaagacaaagatat
cggttggatgatggcagaaagcacagagctcactatgaatttgacaagtttgtgagaagg
aatgaagaagagctgaaatgggggaaaggatacagccaagacagagggaagaaagggaac
cacaactacagcttcactgtggaggccgtagacaaactgggtaaagaggacaagtgtgat
gacatggcatccaaaaaggagcgcataagaaataaggatcgtccagccatgcagttatac
cagccaggagctcgcattcgaacacatacgggatctacaagtaagatctatgactgcagt
gggaagtcctctgaagacgcctgcgatagaaagtatgagtttttacagagaagaacagtt
acttttctaatgggaggtcctggactgtttgctgaacttctggagggaggccagaagatt
gcaaccatgacaagcatctcagagcgatggaagaggctattccatctgttgcagaatctg
ctgcatccagaccagcccgcagagctgctctggcaaccaacttgccctcctcaatcaatg
tggaaatcctgttttgcatcgtttgggagcttgtccttgaactttaacactgtatcccac
atgaaaaattgtatcaccaaagcaaaacgttctcacttgtaa
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