Mauremys reevesii (Reeves's turtle): 120398567
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Entry
120398567 CDS
T07797
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120398567 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrv03400
]
120398567 (LIG4)
Enzymes [BR:
mrv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
120398567 (LIG4)
DNA repair and recombination proteins [BR:
mrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
120398567 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
Ribosomal_S5_C
Phage_term_smal
Motif
Other DBs
NCBI-GeneID:
120398567
NCBI-ProteinID:
XP_039381998
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All DBs
Position
LG1:complement(109738957..109750410)
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AA seq
913 aa
AA seq
DB search
MSSSPTSQSSPKRTVASVVPFADLCSILERIQKCKSRPEKIKYFKEFLDSWRKFHDALHK
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTP
TGSHGDAGDFAMIAYFVLKPRCPKQGRLTIQQVNELLDSVASNNAAKRKDLVKKSLLQLI
TQSSALEQKWLIRMIIKDLKLGVSQQTIFSLFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIANVQQIEKQMNHQSFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFKNSIQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMV
DDSDLQTCFCVFDVLMVNDQKLGHEILSKRYEILNELFTPITGRIHIVHKTQASTRKEVV
DALNEAIDNREEGIMIKNPMSVYKPDKRGEGWLKIKPEYVNGLMDELDLLIIGGYWGKGL
RGGMMSHFLCAVAETSPPGEKPSVFHSICRVGSGYTMKELYDLGLKLAKHWKPYRKRDPP
CNILCGTEKPEVYIEPCNSVIVQIKAAEIVTSDMYKTDCTLRFPRIEKIREDKEWHECMT
LDFLEQLRGKASGKLASKHLDMGDDEPQEKKRKTVPKVKKIIGIMDHFKAPDLSNVNKIS
NIFKDVEFCVMTGTENHSKSELESKVAESGGNVVQNPGPDTYCVIAGIENVRVKNIISSN
KHDVVRAEWLLQCFETKMFVPWQPAFMIHMSPDTKQHFACEYDRYGDSYTADTDVTQLKE
VFSRINNKNDEKMPLDMIADLEERYLWNSSPLCMFRQNTIYLDLYAVVNDPSTKTHGTML
SVRALELRFHGAKIVSQLKEGVSHVIIGEDHTHVKEIKALRRTFEKKFKILSELWVTDSI
KEGKLQNENPYLI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcacctacttcacaatcttctcctaaacgaactgtggcctcagtagttcct
tttgcagatctgtgttcaattttagaacgaatacagaaatgtaaatcccggccagagaaa
atcaagtatttcaaggaatttttagattcatggaggaaatttcatgatgctcttcataaa
aaagagaaagatgtcacagactctttttatccagcaatgcgacttattcttccacaattg
gaaagagagagaatggcttatggaattaaagaaaccatgcttgctaagctctatattgaa
ctgctcaatttacccaaagaaggaaaagatgccctaaaacttttaaattatagaacacct
actggctcccatggagatgctggagactttgcaatgattgcctattttgtattgaaaccg
aggtgcccaaaacaaggcagactgaccatacaacaggtgaatgagctgttggattcagtt
gctagtaataatgctgccaaaaggaaggacctagtaaagaaaagtcttcttcagttaata
actcagagctcagcacttgaacaaaagtggctgatccggatgattataaaggatctaaaa
cttggtgttagtcagcaaaccatattttcccttttccatcctgatgctgctgagttacac
aatgtcacaactgacctggagaaagtttgcagacaattgcatgacccttctgtatcactc
agtgatgtttccatcatgttgttttctgcctttaaacctatgcttgctgctattgctaat
gtccagcaaattgagaaacaaatgaaccaccaaagtttttacatagaaactaaactagat
ggtgaacgtatgcagatgcacaaagatggagatgtatacaagtatttctcccgtaatggg
tttgattatactcagcagtttggtgcttctccccttgaaggttcattaactccatttatt
cataatgtgtttaaaaatagtatacaaaactgcattcttgatggtgaaatgatggcctac
aatcccaatacacaaacttttatgcagaagggaaacaaatttgacataaaaagaatggta
gatgattctgatctgcagacatgcttttgtgtgtttgatgtattaatggttaatgatcag
aagttgggtcatgagatactaagcaaaagatatgagattctaaatgagctgtttacacca
ataacaggcagaatacacatagtgcataaaacacaggctagcaccaggaaagaagtagtt
gatgctttaaatgaagcaatagataacagagaagaaggaatcatgataaaaaatcctatg
tccgtttacaagccagacaaacgtggggaaggctggttaaaaatcaaaccagagtatgtc
aatgggctcatggatgaactagacctattaattattggcggttactggggaaaaggtttg
cgtggtggcatgatgtctcattttttgtgtgctgttgctgagacttcccctcctggcgaa
aaaccatctgtctttcattctatttgtcgtgttggttctggttacactatgaaggagcta
tacgatcttggtttgaaattggccaaacactggaagccttaccgtaaaagagatcctccc
tgtaatattttgtgtggaactgagaagcctgaagtctacatcgagccttgtaactcagtc
atagttcagattaaggcagcggagattgttactagtgatatgtacaaaactgattgcact
ttgcgattccctcgaattgagaaaataagagaggacaaagagtggcatgaatgtatgact
ttggatttcttagaacagctcagaggtaaagcatcagggaagctagcatctaagcacctt
gatatgggtgatgatgaaccacaagaaaagaaacggaaaactgtaccaaaggttaagaaa
ataattggaattatggatcattttaaagcccctgatctttccaatgtaaataagatttct
aatatatttaaagacgttgagttttgtgttatgactggaacagaaaaccattcaaaatct
gaactggaaagtaaagtagcagaaagtggtggtaatgtggtacaaaaccctggaccagac
acttactgtgttattgcaggaattgagaatgtcagagtaaaaaatattatatcttccaac
aagcatgatgttgtgagagcagagtggcttttacagtgttttgaaacaaaaatgttcgta
ccatggcagcctgccttcatgattcacatgtctccagatacaaaacaacattttgcatgt
gagtatgatcgttatggtgacagctacacagcagatacagatgtgacccaactaaaggaa
gtattctcaagaattaataataaaaatgatgagaagatgcctctggacatgattgctgac
ttagaagaacgttatttgtggaatagctctccactctgtatgttcaggcaaaataccatt
tatctggacctttatgctgttgttaatgaccccagtaccaagacccatggaacaatgcta
tcagttagagctttggagctacgtttccatggagcaaaaatagtctcgcagctaaaggag
ggtgtgtcccatgtaattataggagaagatcatacccatgtgaaagagataaaagcactt
aggagaacatttgagaaaaaatttaaaatcctatctgagctgtgggtaacagattcaata
aaggaggggaagttacagaatgaaaatccatacctaatttaa
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