Mauremys reevesii (Reeves's turtle): 120402983
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Entry
120402983 CDS
T07797
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrv03000
]
120402983 (SOX6)
Transcription factors [BR:
mrv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120402983 (SOX6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120402983
NCBI-ProteinID:
XP_039389564
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All DBs
Position
LG4:complement(102143512..102644591)
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AA seq
836 aa
AA seq
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MPSSSEVLAGVVGENRTEEWKNSHYIRMSSKQATSPFACAADGEEAMTQDLASRDKEEGN
NDHHVASHLPLHTLMHNKPHSEELPTLVTTIQQDADWDSVISAQHRMESESNKLCSLYSF
RNTSTSPHKPDEGGRDRSELMTSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSS
CMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIP
IFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYA
AQLASMQVSPGAKMPSTPQAPNTTGALSPTGMKNEKRGTSPITQVKDEAAQPLNLSARPK
TAEPVKSPTSPTQSLFPASKTSPVNVPNKSGIPSPIGGTLGRGSSLDILSSLNSPALFGD
QDTVMKAIQEARKMREQIQREQQQQQPPHGVDVKLPSMNNMGLNNCRNEKMPVRIDAITG
RICIRTVDTERTRFENLGPQLTGKPSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQY
YCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS
KILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQ
LMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTAPSPQMTSDCSSTSASPEPS
IPVIQSTYGMKTDSGSLAGNEIINGEDEMEMYEDYEDDPKSDYSSENEAHEAVSAN
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaagttctgaagtgctggctggtgtggtaggagaaaacaggacagaagagtgg
aagaacagccattatataagaatgtcttccaagcaggccacctctccatttgcctgtgca
gctgatggagaggaagcaatgacccaggatttagcatcacgagacaaggaagagggcaac
aatgatcatcatgtggcctcccatctgcctctacacaccctaatgcacaacaaacctcat
tcggaggagctaccgactctggtcaccaccatccaacaagacgctgactgggacagtgtt
atctcagcccagcatagaatggagtcagagagtaataagttatgttccctatattccttc
cggaatacctctacctcaccacacaagcccgacgaaggaggtcgcgatcgcagtgagcta
atgaccagtgttaattttggaactccagaacgccgcaaaggaagccttgctgatgtggtg
gacacactgaaacagaagaaactagaggaaatgaccaggactgaacaggaagactcatct
tgcatggaaaaactactttctaaagactggaaggagaaaatggaaagactaaatacaagt
gaactccttggagaaattaaaggtacaccagaaagcctggcagaaaaagagcgacagctc
tctaccatgatcacccagctgatcagtttacgggagcagctcctggctgcccatgatgaa
cagaaaaagctggcagcctcacaaattgaaaaacaacggcagcaaatggaccttgctcgc
caacagcaagaacagattgcaagacaacaacagcaacttttgcaacagcagcacaaaatt
aatctactgcagcagcaaattcagcaggttcagggtcacatgcctccgctcatgatccca
atttttccacacgaccagcggacattggcagcggctgctgcagcccagcagggattcctc
ttccccccaggaataacttataagccaggtgataactaccctgtgcagttcattccatca
acaatggcagctgctgctgcttctggactcagccctttacagctccagcaactctatgca
gctcagctggccagcatgcaggtttctcctggagccaagatgccttctactccccaggca
ccgaacacgacaggggcactctcacccaccgggatgaaaaacgaaaagcgagggaccagc
cctataactcaagtgaaggatgaagcagcgcagccactgaatctctcagcccgacccaaa
acagctgaacctgtcaaatccccgacgtcaccgacgcagagcctcttcccagctagtaaa
accagtccagtgaatgtgccaaataaaagtggcatcccgagccctattggagggacattg
ggaagaggatcctctttagatatcctttccagtcttaactcaccggccctatttggggac
caggacacggtcatgaaagccatacaggaggctcgaaagatgagagagcagatccagagg
gagcagcagcagcagcagccacctcatggtgtcgatgtaaaactgccctctatgaataac
atgggtctaaacaactgcaggaatgaaaagatgccagtgcggatagatgccatcactgga
aggatatgcattagaactgtagacacagaaagaacacgctttgagaatttaggcccacag
ttaacagggaaacccagtgaagatggaaaactgggcccaggagtcattgacctcacaagg
ccagaagatgcagagggaagtaaagcaatgaatggctctgcagctaaactacagcagtat
tattgttggccaacaggaggtgccactgtggctgaagctcgagtctacagggacgcacgg
ggccgagccagtagtgaaccgcatatcaagcgaccaatgaacgctttcatggtttgggca
aaggatgaacgcagaaaaattctccaagcttttcctgacatgcacaactccaatattagc
aaaatcctaggctctcgctggaaatccatgtctaatcaagagaaacaaccttactatgaa
gaacaggcacggctaagtaaaatccatctagagaagtaccctaactacaaatacaaacct
cgaccaaaacgcacctgtattgttgatggcaagaaactgcgtattggagaatataaacaa
ctgatgaggtctcgaagacaggagatgaggcagttttttactgtgggacagcagcctcag
attccaatcaccacaggaacaggtgttgtctatcctggtgctattactatggcaactacc
gcaccatcacctcagatgacatctgactgctctagcacctctgccagtccagagcccagc
atccctgtcattcagagcacttacggtatgaaaacagacagcggaagccttgctggaaat
gaaataataaatggagaggatgagatggaaatgtatgaggactatgaggatgatcccaaa
tcagactatagcagtgaaaatgaagcccacgaggctgtcagtgccaactga
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