Mucilaginibacter sabulilitoris: SNE25_00020
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Entry
SNE25_00020 CDS
T09599
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab03410
Base excision repair
msab03430
Mismatch repair
msab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SNE25_00020 (recJ)
03430 Mismatch repair
SNE25_00020 (recJ)
03440 Homologous recombination
SNE25_00020 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msab03400
]
SNE25_00020 (recJ)
DNA repair and recombination proteins [BR:
msab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SNE25_00020 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SNE25_00020 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SNE25_00020 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WPU93908
LinkDB
All DBs
Position
complement(4329..6026)
Genome browser
AA seq
565 aa
AA seq
DB search
MNKRWTVRDNADQDVVKKLAVELNIDPVLSTLLVHRGIGTFEEARYFFRPDQRHLHDPFL
MKDMEKAIMRIEDAIAAGEKILVYGDYDVDGTTAVATVYGFFKGWYPKLEYYIPDRYKEG
YGISTQGIDYAADNGFTLIIALDCGIKSVDKIEYANSRGVDFIICDHHLPGAELPAAVAV
LDPKRNDCEYPYKELSGCGIGFKLIQAYAEKHDIPFEEVARFLDLVAISISCDIVHITGE
NRVLAHFGLQKINTDPCIGVKTLMQVAGRTGSFTISDVVFLLGPRINAAGRIDDAKHAVE
LLIACDEDIAKEKGLMINTRNAERKGHDLDITGEALNMIDNDEVLINRKSTVVFNENWHK
GVIGIVASRLTEKYYRPTIVLTRSNGHVAGSARSVLGYDLYEALCECKDLLIQFGGHKYA
AGLTMEPENVEAFKARFEEVVSATISPEQLIQQIQIDAELRLSQIEPKFFRILNQFAPFG
PENMSPVFISKNVYVSGNVGLVGAAHIKMNLMQEGSAAFDCIAFNHGEYLPQLKSGVPFD
ICYSIEENVWRERRTIQLNIKGIRI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgttggacggtaagggataatgctgatcaggatgtggtcaaaaaattagcc
gtcgagcttaatattgatcctgttttaagtactttgctggttcacaggggtataggtact
tttgaagaggctcgttactttttcaggcccgaccaacggcacctgcatgatccttttttg
atgaaggatatggaaaaggccattatgcgtatagaagatgccatagccgctggcgaaaaa
atattggtatatggtgattatgatgtagatggtactaccgctgttgcaacggtatatgga
ttttttaaaggctggtatccaaaactggagtattacatacccgaccgctataaggaaggt
tatggcatatctacacagggaattgattatgctgcggataatggctttacactgattatt
gcactcgattgcggcattaaatcggttgataaaattgaatatgctaatagtcgcggcgtt
gatttcatcatttgtgaccaccacctccccggtgccgaactaccggccgcggtagcggta
cttgaccccaaacgaaacgattgtgaatatccgtacaaagagctttcaggctgcggtatt
gggtttaagctgatacaggcttatgccgaaaaacacgatatcccttttgaagaggttgcc
cgctttcttgacctggtggctatcagtatatcctgtgatattgtacacattacaggcgaa
aaccgagtactggcgcatttcggcctgcaaaaaattaataccgacccttgcatcggtgta
aaaacattaatgcaagtagctgggcgtacaggtagctttaccatctccgacgtggttttt
ttactggggccgcgtattaatgctgccggtcgcatagatgatgccaagcatgcggttgaa
ctgctgattgcctgtgatgaagatattgccaaagagaaaggcctcatgatcaacacccgg
aatgccgagcgaaaagggcatgatctggatattaccggtgaggcgttgaatatgatagat
aatgatgaggtgttgataaaccggaaatcgactgtggtttttaacgaaaactggcataag
ggggttattggtatagttgcatcgcgccttaccgaaaaatattaccggccaaccattgtg
cttacgcgttcaaacgggcacgtagccggttcggcccgttcagtattgggatatgacctg
tacgaagccctgtgcgagtgcaaagatctattgatacaatttggcggacacaaatatgcg
gcgggcctaaccatggaacccgaaaatgtagaagcctttaaagctcgttttgaggaggtg
gtaagcgctactatttcacccgaacaattgatacagcaaatacaaatagacgccgaatta
cgtttaagccagatagagcccaagtttttcaggatattgaaccagtttgcaccatttggg
ccggaaaatatgtcgccagttttcataagtaaaaatgtgtatgttagcggtaacgtaggc
ctggtgggtgcggcacatatcaaaatgaaccttatgcaggaaggttcagcagcttttgat
tgtattgcctttaaccacggcgaatacttaccccagttaaaaagcggcgtcccgtttgac
atttgctacagcattgaagaaaatgtgtggcgcgaaagacgaactatacaattgaatata
aaaggaataaggatttaa
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