Mucilaginibacter sabulilitoris: SNE25_24290
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Entry
SNE25_24290 CDS
T09599
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SNE25_24290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msab03021
]
SNE25_24290
Transcription machinery [BR:
msab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SNE25_24290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_r4
Sigma70_ECF
Phage_antitermQ
DUF2205
Motif
Other DBs
NCBI-ProteinID:
WPU92451
LinkDB
All DBs
Position
complement(5719043..5719630)
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AA seq
195 aa
AA seq
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MSDYGSYTDEQLTFYLKKGEQTAFTEIYNRYWRVMLAVAWNHCKDRAISKDIVHDVFISL
WERRDQVNIQNLPGFLAGSVKLSVYHYYQKEQRRSELARKNFEYETIAKEEDKLDARFLQ
QYIDGMVEELPEKCRLVFRYSREIGMKNSEIAAQMQISEKGVEANLTRALKIIRGGLKKY
GVMLIVAIHVYRSIF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatggctcatatacagatgagcagttaaccttttatttaaaaaaaggtgag
caaactgcctttaccgagatttataaccgatactggcgggtaatgctggctgtggcatgg
aatcactgtaaggatcgggctatttctaaagacattgtgcacgatgtgtttatttcgcta
tgggaaagacgtgaccaggtaaatattcaaaacctgcccggctttttggctggctcggta
aaattaagtgtgtatcactattatcaaaaagagcaacggcgcagtgagctcgcccggaaa
aattttgaatatgaaaccattgctaaagaagaagataaactggacgctcgctttttgcag
cagtatattgatgggatggttgaagaactccctgaaaaatgccgcctggtatttcgctac
agccgtgaaattggtatgaaaaactcagagatagctgcccaaatgcagatttctgaaaaa
ggggtagaggctaacctgacccgtgcccttaagatcattcgtggggggcttaaaaaatac
ggcgtaatgttaattgtcgccattcatgtttaccgttctattttctga
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