Mycobacterium saskatchewanense: MSAS_50160
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Entry
MSAS_50160 CDS
T07413
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak00521
Streptomycin biosynthesis
msak00523
Polyketide sugar unit biosynthesis
msak00525
Acarbose and validamycin biosynthesis
msak00541
O-Antigen nucleotide sugar biosynthesis
msak01100
Metabolic pathways
msak01110
Biosynthesis of secondary metabolites
msak01250
Biosynthesis of nucleotide sugars
Module
msak_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MSAS_50160 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSAS_50160 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MSAS_50160 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSAS_50160 (rfbB)
00525 Acarbose and validamycin biosynthesis
MSAS_50160 (rfbB)
Enzymes [BR:
msak01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MSAS_50160 (rfbB)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
BBX65842
UniProt:
A0A7I7M1W3
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Position
complement(5319962..5320963)
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AA seq
333 aa
AA seq
DB search
MRSVSRVLVTGGAGFLGAHLCGRLLDAGAEVVSVDDLSTSPPGAATRLTRRAGYHFVQHD
ICDPGVIGLVGADFDTVFHLASPASPIDYQRLPLATLRAGSAGTETALQIAERDGARLVL
ASTSEVYGDPEQHPQPETYWGNVNPVGPRSVYDEAKRYAEALAFAYRRLGRVDVGVARIF
NTYGPGMRADDGRMVPTFCRQALRGEPMTVAGSGLQTRSLCFVDDTVAGLMALARTDFSG
PVNIGNPMELTVLAAAELIRDLAGSKSTIRLTPPAEDDPQRRCPDITLAREQLGWQPRVD
YRTGLATTVAWFRTTVADEPGPGLSRAPQQLAQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccgtctcgcgtgtcctggtcaccgggggcgccggtttcctgggagctcaccta
tgtgggcggctgctcgacgccggcgccgaggtggtcagcgtcgacgacctgtccaccagc
ccgccgggcgcggcgacccggctgacccggcgcgccgggtatcactttgtgcagcacgac
atctgcgatcccggcgtgatcggactggtgggtgccgacttcgacaccgtgttccatctg
gcttcgccggcctcgccgatcgactaccagaggttgccgctggcgaccctgcgcgccgga
tcggccggcaccgagacggcgctgcagatcgccgaacgggacggggcccgcctggtgctg
gcctccaccagtgaggtctacggcgatcccgagcagcacccgcaaccggaaacgtactgg
ggcaacgtcaatcccgtcggcccgcgcagtgtgtacgacgaggccaagcggtatgcggag
gccttggcgttcgcctatcgccgactcggccgggtcgacgtcggggtggcgcgcatcttc
aacacctacgggccgggcatgcgcgccgacgacggccgcatggtcccgacgttttgccgc
caggcgctgcggggcgaaccgatgacggtggcgggcagcggcctgcagacgcgttccctg
tgcttcgtcgacgacaccgtcgcgggcctgatggcgttggcgcgcaccgacttcagcggc
cccgtcaacatcggtaacccgatggaactcacggtgctggccgcggccgagttgatccgg
gacctggcgggcagcaagtcgacgatccggctcaccccgccggccgaggacgacccgcag
cgccgctgccccgacatcacgctggcccgcgagcagctgggctggcagccgcgtgtcgac
taccgcacgggcctcgccaccaccgtcgcgtggttccgcaccacggtggccgacgaaccc
gggccaggcctctcccgggccccccagcaactggcgcagtag
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