Micropterus salmoides (largemouth bass): 119885695
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Entry
119885695 CDS
T07309
Symbol
trim62.1
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119885695 (trim62.1)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119885695 (trim62.1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119885695 (trim62.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
CorA
zf-RING_6
zf-RING_5
KxDL
zf-RING_10
Phasin
U-box
AAA_13
Spc24
Snapin_Pallidin
DUF6872
zf-Nse
DUF4795
DUF1664
Motif
Other DBs
NCBI-GeneID:
119885695
NCBI-ProteinID:
XP_038551814
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MACCLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEPHGTRDCPECRRTFADP
LLSPSLKLSNIVERYSAFPLDAILNAQRSSYPCKDHEKVKLFCLTDKSLVCFFCDEPALH
EQHQVTTIDEAYEEIQREMKEQLATLQDSEKGHTEALQLLQRQLTETKSSAKSLRATIGD
AFERLHRFLRERQKSMLEELEMDTARKLADIEHKIQRYSQQLRDVKEGIQILQERLNESG
RHDFLEGVAVTSERIKGKIHETNLTYEDFPTSKYMGPLQYTIWKLLFQDVSPVPAALTLD
PITAHQRLILSDDCTIVAYGNLHPQPLQDSPRRFDVEVSVLGAEGFASGVHYWEVMVSEK
TQWMIGVANETVSRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVKSKLEKVGVYL
DYPKGLLIFYNADDMSWLYTYREKFPAKVFPYFSPGQSHANGKNVQPLRINTVRL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctgtctgaaggacgagctcctctgttccatctgcctcagcatctaccaggac
cccgtcagctttggctgtgagcactacttctgcagaaagtgtattaccgagcactggagc
aggcaggagcctcacggaacacgggactgtcctgagtgccggaggacctttgcagatccc
ctcctctcgccgagtctcaagttgtccaacattgtggagcgctactcggccttccctctg
gacgccatcctcaacgcccagaggagctcctacccctgcaaggaccacgagaaggtgaag
ctcttctgcctcaccgacaaaagtctggtgtgcttcttctgcgacgagccggcactacac
gagcagcaccaagtaaccactattgacgaggcctacgaggagatacagagggagatgaag
gagcagctggccaccctgcaggacagtgagaagggacacacagaggccctgcagctcctg
caaagacaacttactgagaccaagtcctcagccaagagtctgcgtgcaaccatcggcgac
gcatttgagcgccttcaccgcttcctgcgcgagcgacagaagagcatgctggaagagctg
gagatggacacggcccgcaagctggccgacatcgagcacaagattcagcgctatagccag
cagttgcgcgacgtcaaggagggcatccagatcctgcaggagcgtctcaacgagtcagga
agacatgacttcctggagggagtagccgtcacatctgagaggattaaagggaagatacat
gagaccaatctgacgtatgaagacttcccgacatccaagtacatggggcccttgcagtac
acaatatggaagttgctcttccaggatgtctcaccagtgccagcagcgttgaccctcgac
cccatcacagcccaccaaagactgatcctctcagacgactgtaccatagtggcctatggg
aatctgcacccgcagcccctgcaagactccccacggcgctttgacgtagaggtgtctgtt
ctgggcgcagagggctttgcgtcgggcgtccattactgggaggtgatggtgtcggagaag
acccaatggatgatcggtgtggccaacgagacagtcagccgcaaaggcagcatccagatc
cagcccagccgcggcttttactgcatcgtcatgcacgacgggaaccagtacagtgcctgc
accgagccctggacccgcctcaacgtcaagagcaagctggagaaggtgggggtgtatctg
gactaccccaaaggcctgctcatcttctacaatgcagacgacatgtcctggctctacacc
taccgggagaaatttcccgccaaggtcttcccctacttcagcccgggccagagccacgcc
aatggcaagaacgtgcagccgctgcgaatcaacactgtacgcctttaa
DBGET
integrated database retrieval system
