Micropterus salmoides (largemouth bass): 119885979
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Entry
119885979 CDS
T07309
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119885979
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119885979
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119885979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Lzipper-MIP1
zf-RING_11
zf-ANAPC11
zf-C3HC4_4
ING
HIP1_clath_bdg
zf-RING_16
T3SSipB
zf-RING-like
CENP-F_leu_zip
Crescentin
Zn-ribbon_8
UPF0242
Filament
WEMBL
RINGv
bZIP_1
FANCL_C
zf-Nse
SLX1_C
KASH_CCD
Prominin
GAS
Motif
Other DBs
NCBI-GeneID:
119885979
NCBI-ProteinID:
XP_038552299
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIS
KLFFDIGGEEEASADPESLQNELDRMKALLNSKEQDWREKQKVADSLKDTVDKQRRDLDS
ARKEIKEKEMLCSALRQQMTYLEMQHNEAQAAKEEARRLRTKMKTFESLDVLLQGQRAEV
ESMITDMGVSQAAVEQLSIYCISLKKEYDNLKGGLKSSNDMCEKLKREVLASNNKFQKAS
MEANQTKEDMKSLLNDLANADKEISSLKKKVEFLQRTLSTPTRTNEALSRLIFESPAPVD
LKQPRLHHPTDSEDIDLNMTYDITTPDDVAKRPKQVPSKKMRLDPPASSVSKHNERSLSQ
SKARDEEGSMDPFLRNSLLFRKKTFGSMLDPQRKPGVLRTGYDGLGGRTKFIQPSPLSEI
RPLMKAKRKKVTRPPPKIATCLTLDSFLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcatattgcacgatttgctccgattttttcgatcactccagagatgtt
gctgccatccactgcggacatactttccactatgaatgtcttctccagtggtttcagaca
gccccgacaaaaacctgtccacaatgtagaaaacaggtcagcaccagacacattatcagc
aagctgttctttgatattggtggagaggaggaggcctcagcggaccctgaaagcttgcag
aatgagcttgataggatgaaggcacttttaaactctaaagagcaagactggcgagagaaa
cagaaggtggcggacagtttgaaggacactgtagacaagcagaggagagacctggacagt
gcacggaaagagattaaggaaaaggagatgctctgttctgccctcagacaacagatgaca
tacctggagatgcaacacaatgaagctcaggctgccaaggaggaggcccggagactcagg
accaaaatgaaaacctttgaaagcctggacgtgttgttgcagggccagagagcagaggtg
gagtccatgatcacagacatgggtgtcagccaggcggcagtggagcagctctccatctac
tgtatttcgctcaaaaaagagtatgataatctaaaaggaggcctgaagtcttcaaatgac
atgtgtgagaagctgaagagagaagtgctcgcctcaaacaacaagtttcaaaaagcctca
atggaggcgaatcagactaaagaggacatgaagtctctgctgaacgatctggccaatgct
gacaaagagatctctagtctgaagaagaaagtggagtttcttcagcgaaccctgagcacc
ccgacacggacaaatgaagctctcagtcggctcatctttgaaagcccagccccagtggac
ttgaagcagcctcgccttcaccatccgacagatagcgaggacattgacctcaacatgact
tatgacatcactactccggacgacgtggccaagaggccaaaacaggtcccatccaagaag
atgcgacttgaccctccagcgtcgtcggtgtccaaacacaacgagagaagtttatctcaa
agcaaggctcgagatgaggagggatccatggatccttttttgaggaactccctactcttc
agaaagaagactttcggtagcatgttggatcctcagcggaagcccggcgttttgagaact
ggttatgatggtttaggaggacgaactaaattcatccaaccttctcctttatcagagatt
cgccccctgatgaaagctaaaaggaaaaaggtaaccaggcctccacccaagattgcaact
tgcctgactctggacagcttcctcgagtaa
DBGET
integrated database retrieval system
