KEGG   Micropterus salmoides (largemouth bass): 119888927
Entry
119888927         CDS       T07309                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03420  Nucleotide excision repair
msam04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119888927 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119888927 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119888927 (cul4b)
   03400 DNA repair and recombination proteins [BR:msam03400]
    119888927 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119888927 (cul4b)
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     119888927 (cul4b)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      119888927 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119888927 (cul4b)
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119888927 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 119888927
NCBI-ProteinID: XP_038555656
LinkDB
Position
Unknown
AA seq 874 aa
MFPTGLSSPNPPPPPTQEARPAANVTDVKNESGNITSTKKRKINGSEREDTTGTISSSPP
KTLNSSSSSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAVAASCSNN
KSKAVFLSGGVGHHANGLTKTAGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQK
LKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDA
LDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISD
LKVQSKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAA
EGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQK
GLTHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQEL
LDFKDKVDHVIDICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEAT
DEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGA
AFTSKLEGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPP
EMVRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGRKELQVSLFQTLVLLMFNEG
EEFTLEEIKLATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDEFKHKLF
RIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKF
PVKPADLKKRIESLIDRDYMERDKENPNQYNYVA
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaactcaggaggctaga
ccagcagctaacgttactgatgtcaaaaacgagagcggcaacatcacatctacgaagaag
aggaaaataaacggctcggagagggaagacactactggcacgatctcttcttcgcctccc
aagaccctgaattcctcctcctcctcttcttcttcctcctcctcctgctctcccactccg
ctgcacattcagaagaagttgaggtttgaggattcagtggatttcattggactggatgtg
aaaatggctgaggaggctgctgctgccgccgccgctgttgctgcttcttgctccaataac
aaaagcaaagccgtgttcctgtccggtggcgtgggacaccatgcaaacggactgacgaaa
accgcaggctccggcaccttctccaacagtaaacccggggcagccaagaaactagtcatc
aagaacttcaaagaaaaacccaaattgcctgagaactacacacaggagacgtggcagaaa
ctaaaggaagccgtcgaggccatacagaacagcacttcaatcaagtacaatctagaggag
ctctaccaggctgttgagaacctgtgctcccataagatatctgccaagctttacaaacag
ctgagggccgtgtgtgaagaccacatcaaggcacaaattgatcagttcagagaggatgcc
ctggacagtgtgcttttcctaaagaaaattgacaagtgctggcaggatcactgcagacaa
atgatcatgattaggagtatatttttgtttttggaccgcacctacgttttacaaaattca
atgcttccatcaatctgggacatgggtctggagctgttcaggttctacatcatcagtgat
ctgaaggtccagagtaaaaccattgacgggattctgctgctcattgagagggagcgaaac
ggggaggcgatagatcgcagtctactgaggagcctgctgagcatgctctctgacctgcag
atttatcaagactcctttgagcagcgctttttggaggaaactaatcgactgtacgctgca
gagggacagaggctgatgcaggagagagaggtacctgaatatctccatcatgtcaacaaa
cgcttggaggaggaggctgacagagtcatcacatatctagatcagagcacacaaaaacca
ctcattgctactgtggagaagcagttgctgggtgaacatctcacggcaactctgcaaaaa
gggttgactcacctgctggatgagaacagaattcaggatctgtctcttctctatcagctg
ttcagtcgagtgcgaggtggtgttcaggtcctcctgcaacactggatagagtacataaag
gcttttggaagcacaatagtaatcaatcctgaaaaagacaaaacaatggtgcaagagtta
ctggacttcaaagacaaggtggatcacgtcatcgacatctgcttcatgaaaaacgagaag
ttcgtcaacgctatgaaggaggcttttgaaacgttcatcaacaaacggccaaataaacct
gcagagctcatagcaaaacacgtggattcaaagctaagggcaggaaacaaagaggcaacc
gatgaagaactggagaagatgctggataagatcatgattatctttagattcatctatgga
aaagatgtttttgaggccttttacaaaaaggatctggccaagaggttgctagttggaaaa
agtgcctctgtggatgctgagaaatcgatgttgtcgaagctgaaacatgaatgtggagca
gcattcaccagcaaactggaggggatgttcaaggatatggagctctctaaagacatcatg
gtgcagttcaaacagtatatgcagtgccagaacattcctggcaacatagagctgacggtg
aacatcctcacgatgggttactggccgacctatgtcccgatggaagtgcatctgcctcca
gagatggtgcgactgcaagagatctttaagacattctacctgggcaaacacagtggcagg
aagctgcagtggcaatcaacacttggccattgtgtcttaaaagctgaatttaaagagggc
cggaaggagctgcaggtgtcacttttccaaacacttgtgttactgatgtttaacgaagga
gaggagttcaccctggaggagattaaactggcaacaggaatagaggacagtgaactgcgt
cgtacactgcagtcacttgcttgtgggaaagcacgtgtcctcaccaaaatcccaaaaagc
aaagacgtggaggatggggacaagttttcttgcaatgacgaattcaaacacaaactcttc
aggatcaaaataaaccagatccagatgaaagaaacggtggaggaacaagccagcaccaca
gaaagggtctttcaggatcgtcagtatcagattgatgccgccatcgtgcggattatgaag
atgaggaagactctgagccataatcttctgatgtctgaggtgtacaaccagctcaagttc
cctgtcaagcctgctgacttgaagaaaaggatagagtctcttattgacagggactatatg
gagcgtgacaaggagaaccccaaccagtacaactatgtggcttag

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