Micropterus salmoides (largemouth bass): 119888927
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Entry
119888927 CDS
T07309
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03420
Nucleotide excision repair
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119888927 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
119888927 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119888927 (cul4b)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119888927 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119888927 (cul4b)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
119888927 (cul4b)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119888927 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
119888927 (cul4b)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119888927 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
119888927
NCBI-ProteinID:
XP_038555656
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPAANVTDVKNESGNITSTKKRKINGSEREDTTGTISSSPP
KTLNSSSSSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAVAASCSNN
KSKAVFLSGGVGHHANGLTKTAGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQK
LKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDA
LDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISD
LKVQSKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAA
EGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQK
GLTHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQEL
LDFKDKVDHVIDICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEAT
DEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGA
AFTSKLEGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPP
EMVRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGRKELQVSLFQTLVLLMFNEG
EEFTLEEIKLATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDEFKHKLF
RIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKF
PVKPADLKKRIESLIDRDYMERDKENPNQYNYVA
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaactcaggaggctaga
ccagcagctaacgttactgatgtcaaaaacgagagcggcaacatcacatctacgaagaag
aggaaaataaacggctcggagagggaagacactactggcacgatctcttcttcgcctccc
aagaccctgaattcctcctcctcctcttcttcttcctcctcctcctgctctcccactccg
ctgcacattcagaagaagttgaggtttgaggattcagtggatttcattggactggatgtg
aaaatggctgaggaggctgctgctgccgccgccgctgttgctgcttcttgctccaataac
aaaagcaaagccgtgttcctgtccggtggcgtgggacaccatgcaaacggactgacgaaa
accgcaggctccggcaccttctccaacagtaaacccggggcagccaagaaactagtcatc
aagaacttcaaagaaaaacccaaattgcctgagaactacacacaggagacgtggcagaaa
ctaaaggaagccgtcgaggccatacagaacagcacttcaatcaagtacaatctagaggag
ctctaccaggctgttgagaacctgtgctcccataagatatctgccaagctttacaaacag
ctgagggccgtgtgtgaagaccacatcaaggcacaaattgatcagttcagagaggatgcc
ctggacagtgtgcttttcctaaagaaaattgacaagtgctggcaggatcactgcagacaa
atgatcatgattaggagtatatttttgtttttggaccgcacctacgttttacaaaattca
atgcttccatcaatctgggacatgggtctggagctgttcaggttctacatcatcagtgat
ctgaaggtccagagtaaaaccattgacgggattctgctgctcattgagagggagcgaaac
ggggaggcgatagatcgcagtctactgaggagcctgctgagcatgctctctgacctgcag
atttatcaagactcctttgagcagcgctttttggaggaaactaatcgactgtacgctgca
gagggacagaggctgatgcaggagagagaggtacctgaatatctccatcatgtcaacaaa
cgcttggaggaggaggctgacagagtcatcacatatctagatcagagcacacaaaaacca
ctcattgctactgtggagaagcagttgctgggtgaacatctcacggcaactctgcaaaaa
gggttgactcacctgctggatgagaacagaattcaggatctgtctcttctctatcagctg
ttcagtcgagtgcgaggtggtgttcaggtcctcctgcaacactggatagagtacataaag
gcttttggaagcacaatagtaatcaatcctgaaaaagacaaaacaatggtgcaagagtta
ctggacttcaaagacaaggtggatcacgtcatcgacatctgcttcatgaaaaacgagaag
ttcgtcaacgctatgaaggaggcttttgaaacgttcatcaacaaacggccaaataaacct
gcagagctcatagcaaaacacgtggattcaaagctaagggcaggaaacaaagaggcaacc
gatgaagaactggagaagatgctggataagatcatgattatctttagattcatctatgga
aaagatgtttttgaggccttttacaaaaaggatctggccaagaggttgctagttggaaaa
agtgcctctgtggatgctgagaaatcgatgttgtcgaagctgaaacatgaatgtggagca
gcattcaccagcaaactggaggggatgttcaaggatatggagctctctaaagacatcatg
gtgcagttcaaacagtatatgcagtgccagaacattcctggcaacatagagctgacggtg
aacatcctcacgatgggttactggccgacctatgtcccgatggaagtgcatctgcctcca
gagatggtgcgactgcaagagatctttaagacattctacctgggcaaacacagtggcagg
aagctgcagtggcaatcaacacttggccattgtgtcttaaaagctgaatttaaagagggc
cggaaggagctgcaggtgtcacttttccaaacacttgtgttactgatgtttaacgaagga
gaggagttcaccctggaggagattaaactggcaacaggaatagaggacagtgaactgcgt
cgtacactgcagtcacttgcttgtgggaaagcacgtgtcctcaccaaaatcccaaaaagc
aaagacgtggaggatggggacaagttttcttgcaatgacgaattcaaacacaaactcttc
aggatcaaaataaaccagatccagatgaaagaaacggtggaggaacaagccagcaccaca
gaaagggtctttcaggatcgtcagtatcagattgatgccgccatcgtgcggattatgaag
atgaggaagactctgagccataatcttctgatgtctgaggtgtacaaccagctcaagttc
cctgtcaagcctgctgacttgaagaaaaggatagagtctcttattgacagggactatatg
gagcgtgacaaggagaaccccaaccagtacaactatgtggcttag
DBGET
integrated database retrieval system