Micropterus salmoides (largemouth bass): 119889040
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Entry
119889040 CDS
T07309
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119889040
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119889040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
zf-RING_6
U-box
zf-ANAPC11
DUF445
RSS_P20
Gp58
PRP1_N
Prok-RING_4
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
119889040
NCBI-ProteinID:
XP_038555815
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MAQKGVQLDRETISCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEEEEKKIPSCPQCRQT
FTPRPVLLKNTMLAVLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQPHYDAAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQSICYLCPVDE
HKGHDTVSAAAERTERQRELEVSRQNIQQRIQDRQKDVKVLQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKRQLRSQQDTEVSRVKELQEKLEQEITELKRKDAELKQLSHTE
DHTQFLHNYPSLSALSESTDSSSINIRPLRYFEDVTAAVSEVRDKLQDVLTETWTNVLLT
VTEVEVLLSGPEPEPKTRAGFLKYSCEITLDPNTANTWLLLSEGNRKVTFMRKQQSYSSH
PDRFTECWQVLSRESLTGRCYWEVEWRGGRVCVAVAYKNISRAGRSDESGFGFNDKSWAL
RCDTNIYNFLYNSVKTPVSGPRSSRVGVYLDHSAGILSFYSISETMTLLHRVQTTFTQPL
CAGLWLYFYSPGDSAEFCKVK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccatctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggaggagaagaaaatccccagctgccctcagtgcaggcagacc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagttttagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcctgtctggtctgtctg
gcctcttactgtgagaaacacctgcagcctcattatgatgctgctccgttaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttttgccgtactgatcagcagagtatctgttatctctgccctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggaccgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagacagaaagatgtgaaggtg
cttcagcaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcaccgagctgatccgtctgatggagaaaagaaggtctgatgtgaagcggcag
ctcagatcccagcaggacactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacacccagtttctacacaactacccctcactgtcagcactcagtgaatctacagac
tcatccagcatcaacatccgtcctctgcgctactttgaggacgtgacagcggctgtgtca
gaagtcagagacaaactacaggacgttctgacagagacatggacaaacgtcttgctgaca
gtgactgaggtggaggttttactgtcaggaccagaaccagagcccaagaccagagctgga
ttcttaaaatattcatgtgaaatcacactggatccaaacacagcaaacacatggctgtta
ttatctgaggggaacagaaaagtaacattcatgagaaaacaacagtcttattctagtcac
ccagacagattcactgaatgttggcaggtcctgagtagagagagtctgactggacgttgt
tactgggaggtggagtggagaggggggagagtttgtgtagcagtcgcatacaagaatatc
agcagagcagggaggtcagatgaatctggatttggattcaatgacaaatcttgggcgtta
agatgtgacacaaacatttataactttctttacaacagtgtcaaaactcccgtctcaggt
cctcggtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctac
agcatctctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctc
tgtgctggactttggctttatttttattctcctggagactctgctgagttctgtaaagtg
aaatag
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