Micropterus salmoides (largemouth bass): 119891846
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Entry
119891846 CDS
T07309
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
msam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119891846 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
119891846 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119891846 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119891846 (gtf2h2)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119891846 (gtf2h2)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119891846 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
119891846
NCBI-ProteinID:
XP_038559689
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLMEAFVEEYFDQNPISQVGIITTKNKRAEKLTDL
AGNPKKHTDALKKAVDTVCVGEPSLYNSLNLAILTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGLYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTIASITFQDAKPSFSMAHLDSGSGPGLSLGGYFCPQCHAKYTE
LPVECKICGLTLVSAPHLARSFHHLFPLQDFIESAVEELQGDRFCQACQGELKDKSIFTC
PSCCSAFCVECDLFIHDSLHCCPCCIHNQSAP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaccagagagagccaagcgctgggaagggggctacgagaggacatgggag
gtgctgaaggaggacgaatctggctcactcaaagccacggtggaggagatcttgttccag
tccaaaaggaaaagggtgatagagagccatggacaagtaaggcttggaatgatgcgtcac
ctctatgtggtgattgactgttcaagaagtatggaagaccaggacttgaaaccaaatcgc
ctcacctctactctaaagctgatggaagcttttgtcgaggaatattttgaccaaaacccc
atcagtcaggtgggcattatcaccacaaagaataaaagggctgagaagctgactgacctg
gcaggaaatccaaagaagcacactgatgctctgaagaaagcagtggacactgtgtgtgta
ggagagccatccctgtacaactctcttaacctggccatactgaccctcaagcacatgcct
ggacatacgagccgggagatcctgatcatcctcagcagcctcaccacatgtgatccagcc
aacatctacgagctgatcaagaccctgaagtctctgaaggtgagggtgtcggtgattgga
ctgtcagcagaggtccgtgtgtgtacagtgttgaccagggagacgggcggcttgtaccat
gttatcctggacgagagtcacttcaaagagctgctgatgctgcatgtcaaacctcctcca
gccagctcctcatctgaatgctctttaatacgcatgggtttccctcagcacaccatcgcc
tctattactttccaagatgccaagccttcgttcagcatggctcatctggacagcggcagc
ggcccaggtctgtctctgggaggatacttttgtccgcagtgtcacgccaagtacacagag
cttcccgtggagtgtaaaatctgtggtttgactctggtgtcagccccccatcttgccaga
tccttccaccacctctttccgctccaagactttatagagagtgctgtggaggagcttcaa
ggagacaggttctgtcaagcttgtcaaggggagttgaaagataaaagtatatttacctgc
ccatcatgttgcagtgcattctgtgtggagtgtgatctcttcatccacgactcgctgcac
tgctgcccctgctgtattcacaatcagagcgccccctga
DBGET
integrated database retrieval system
