KEGG   Micropterus salmoides (largemouth bass): 119895300
Entry
119895300         CDS       T07309                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K04551  ubiquitin B
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04120  Ubiquitin mediated proteolysis
msam04137  Mitophagy - animal
msam04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119895300 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119895300 (ubb)
   04137 Mitophagy - animal
    119895300 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119895300 (ubb)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119895300 (ubb)
Ubiquitin system [BR:msam04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   119895300 (ubb)
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   119895300 (ubb)
  Exosomal proteins of other body fluids (saliva and urine)
   119895300 (ubb)
  Exosomal proteins of colorectal cancer cells
   119895300 (ubb)
  Exosomal proteins of bladder cancer cells
   119895300 (ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL Sde2_N_Ubi
Other DBs
NCBI-GeneID: 119895300
NCBI-ProteinID: XP_038564244
LinkDB
Position
Unknown
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaacactcactggcaagaccatcaccctggaggttgagcccagc
gacaccattgagaatgtcaaggctaaaatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctccgactacaat
atccagaaggaatccaccctccatcttgtcctgcgtctgaggggcgggatgcagatcttc
gtcaagaccctcaccggcaagaccatcaccctggaggttgagcccagcgacaccattgag
aatgtcaaggctaaaatccaggacaaggaaggcattcccccagaccagcagaggctgatc
tttgccgggaagcagctggaagatggccgcaccctctccgactacaatatccagaaggaa
tccaccctccatcttgtcctgcgtctgaggggcgggatgcagatcttcgtcaagaccctc
accggcaagaccatcaccctggaggtcgagcccagcgacaccattgagaatgtcaaggct
aaaatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctctccgactacaatatccagaaggaatccaccctccat
cttgtcctgcgtctgaggggcggtcaataa

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