Micropterus salmoides (largemouth bass): 119897002
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Entry
119897002 CDS
T07309
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119897002
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119897002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
119897002
NCBI-ProteinID:
XP_038566434
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MALQLVQKKLCCFICLDLLNDPVTIPCGHSYCMSCIKSRWDEEDPKKIYSCPQCSQTFTP
VPVLVKSATFADLVEELKKTRLQAALVDHCYATPGDVACDFCTGRKLKALKSCLVCRVSY
CELHLQPHYESPAFEKHKLIKPSENLQEKFCSRHDEVMKIFCRNDQQIICILCAMDDHKD
HDTVSAAVERNEKQREIGMIRQKIQRRIQDTEKDVKVLQQEIEAINRSADKAVKDSEKIF
TELVSLIEKRSSVVKEQIRSQQKTEVSRATELEEKLEEETAELRRKDTELERLSQTDDIQ
FLLNYPLQSHLSESTDSPSLNIQPLQYFEDVIAALLEAREKLQDIFNKEWLKISLKVTEV
DVLLPQPEPKTRDEFLQYSRQITLDPNTVNIWLSLSGGNRKATVRREKQLYSSHPDRFTD
WLQVLSRESLTGRSYWEVERSSGGVSVAVAYKDISRTGNESGFGNNDMSWALGCFDITYY
FRHNNIRTSLSGPQSSRIGVYLDYKAGTLSFYSISETMTLLHKVQTTFTQPLYAGFGVYW
VGDTAKLGELK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcagctagtccagaaaaaactctgctgttttatctgtctggacctactaaac
gatcccgtgactattccctgtgggcacagctactgcatgagctgtattaaaagccgctgg
gatgaagaggatccaaagaaaatctacagctgccctcagtgtagtcagaccttcacaccg
gtacctgtcctggtgaaaagtgccacttttgctgatttagtggaagagctgaagaagaca
agacttcaagctgctcttgttgatcactgctatgccacaccgggagatgttgcctgtgat
ttctgcactgggagaaagctgaaagccctcaagtcctgtctggtgtgtcgggtctcttat
tgtgaactccaccttcagcctcactatgaatcccctgcctttgagaaacacaagctgatc
aaaccctccgaaaatctgcaggagaaattttgctctcgtcatgatgaggtgatgaagatt
ttctgccgcaacgaccagcagataatatgtattttgtgcgccatggatgaccataaagac
cacgacacagtctcagctgcagtagaaaggaacgagaagcagagggagattggaatgatt
cggcaaaaaatccagcgcagaatccaggacacagagaaagatgtgaaggtgctacagcag
gagatagaggctatcaatcgctctgctgataaagcagtgaaggacagtgagaagattttc
actgagcttgtcagtctcatagagaaaagaagctctgttgtgaaggaacaaatccgatcc
cagcagaagaccgaagttagtcgggccacagagcttgaggagaagctggaggaggagact
gctgagctgagaaggaaggacactgagctggagcgcctctcacaaactgatgacatccag
ttccttctgaattaccctttgcagtcacatctcagtgaatctacagactcacccagttta
aatatccagcctctgcaatactttgaagacgtgatagcagctttgttagaggcccgagaa
aaactacaggacattttcaacaaggaatggctgaagatctcactaaaagtgactgaagta
gatgttttactgccacaaccagagcccaagaccagagatgaattcttacaatattcccgt
caaatcactctggatcccaacacagttaacatctggctgtcattatctggaggcaacaga
aaagcaacagtaaggagagaaaagcaattatattccagtcacccagatagattcactgac
tggcttcaggtcctcagtagagagagtctgactggacgttcttactgggaggtggagaga
agcagcggaggggtttcagtagctgttgcatacaaggacatcagcagaacagggaatgaa
agtggatttggaaacaatgacatgtcttgggcactaggatgttttgacattacttattat
ttcagacataacaatatcagaacttcactctcaggccctcagtcctccagaataggagtg
tacctggattacaaggcaggaactctgtctttctatagcatctctgaaaccatgactctc
cttcacaaagtccagaccacattcactcagccgctctatgctggatttggggtttattgg
gttggagacactgctaagttgggtgagctaaagtag
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