Micropterus salmoides (largemouth bass): 119898803
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Entry
119898803 CDS
T07309
Symbol
pcm1
Name
(RefSeq) pericentriolar material 1 protein isoform X1
KO
K16537
pericentriolar material 1 protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119898803 (pcm1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119898803 (pcm1)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
119898803 (pcm1)
Cilium and associated proteins [BR:
msam03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119898803 (pcm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCM1_C
Motif
Other DBs
NCBI-GeneID:
119898803
NCBI-ProteinID:
XP_038568971
LinkDB
All DBs
Position
Unknown
AA seq
2127 aa
AA seq
DB search
MATGGTPFDDSAEELHNWTVTNGSLEDRLNNMDWGVQQKKANRSSEKNKKKLSAGVVESR
LTNDISPESTPGAGRRRARTPHSFPHIKYTTQMSVPDQAELDKLRQRINFTDLDERSIGS
DSQGRVTAANNQRQLAGENKKPYNFLPLHVNTNKSRELLPPSSSAPATPATTKETKKQGP
GLRDTSTPLVPTKDTPRLSRGGTERGPLAHREYGRGEQRIDSSQVVSKLVQIREYISKAS
SMRDDLVEKSDVPANVERLSHLIDHLKEQEKSYLRFLQKMLTRENEEDDVGTLDSAVGSG
SLAESTTLNIEVCSSDASNATSCRPEMVRFDQKEELENLRKQHELLKKMLEQQEQLRALQ
GRQEALMAMQDSAEQALAVIEDTVVTETTGSVSGLSITSELNDELNDLIQRFHNQLHDSQ
TKAVPDNRRQAESLSLSREVCWSRAPQAVGPPQHRPLLHSASGPHTGLDTGTTAASAKLT
KLKELQDKKQTMDKILRELHSLRDQTLNNNASRGLSTQCSLSMGGSADCPSAVCSNGASA
STSFHPSLTQHQDGSNSTDKLRKLKEVHKRLNELRELVQYYEQTSDMMVDAVNENVKEDD
DDEEQEEEDETEDSSMFEAMFDSEQENRQPITNIRNSQRGGNWTDLNSLTNGRSVRSSAT
NNRDGRLNTECEINNRSAANLRSLNIPSAIECQYNRDTPYNRVKDNDEDEDVLDNDDGAQ
AVAADSEASGSSRRSSLGNDGGFAQKVHRHTAKQKLRQLQELVAMVQSDDTDGTTANEDE
ALHQQPNNTRANVAGSLGAISKQNPRELTLSGKAREKLYEEKLRQQKQELQQLHEERQRL
IEIQGKIQDLQWACPDLQSSVSSTVSQQGLLRKVPVAVSTPAAVQASSSSGPKANSAVLK
PTAPEAATSSVTDNEQLWSEMRRHQILREELRQRRKHLESLMAEHQRRSGLIDSPRQTDD
QEGLATPSQSVSRDERTMATWGSSPCHLDDDDDDEDEDEYRSEMGAEEEEEQDECEESSS
DDDIHIYSSSRNQCSYSNRKNQGSNLKPPPAFLGEGSGNSPLHNKSKANQQQQQQQQQSR
SLNQSASQHGGTRRQENLRWASELSFTEGSCHWQEQVSQLQRQLDFSTSMCQTLLQDQQT
LSYMLQTLLTGQYSVLPNNLSSPQVHLVMHQLNQCYTQLTWQQNNVQRLKQVLNDLIRQQ
QHQQTSTAGWQTQKHGSSQESRSSPSASPGVFLPFSSNLHPSTNNMSTAALSPFLPSLNL
FPLFPAPMGEFPQGAAGQAIPDHQKQQLDPNTSIKTEYMSFPPPLQRSPLNTNTERGSAG
WVKPSYANNTVQHHQSKMEPQESPSSSPTFANHRPRPQEFDRESQESFSSMPDHVDPTTI
TKTFKAGRKASAQANLASRTKTPNSKSRRRRSKGHNKNSEGHESDSVSSTADFAQERAAL
SRQKDQNKSLLDKLTQEKLDSKTKLGNKQNDLSSAYAWRTPFLSNRIACTEAPDASSDFS
LFEALRETIYSEVATLISQNESRPHFLIELFHELQLLNTDYLRQRALYSLQDIVTRHLAE
KSAAEEQLPRLGPVVWAAGSQSELTPSESLATSDTEVVEKNLRLTQDPMKKRDDAESVDN
DSTMSTSSNLEPFANDDLGNTVIHLDKALARIREYERMKLKAEFNPCSTSTAGAGGSEVS
NAEHPSANPADPAEGGAAGDMRCPQIDTQQLDRQIKAIMTEVIPFLKENMDEVCSLQLLT
CVRRMVLTLTQHNDESKEFVRFFHRQLGGILQDSLSKFVGRTLKDCGEDLLVEISEILFN
ELAFFRLMQDLDNSSSIAKHKNKKRAEQPSKAKHSLKENTIAGGNKSVSPAYTDEDKDQD
EAEQEGDSTLRDLYLQTERKNSRSSASEVEEEDEDEGDRQGMPLSISLSKAETQALTNYG
SGEDENEEEEMEEFEAGPVDVQTSLQASADGQVEQEGTRPSETQETKTEQGSSEKEDAEI
NQSVGTTDSTVEDRDTAAYQSPEEESKAGAAATSEGSSAVFHDQDFQKETTTTSSPDTDS
PVMINVDEMGSGNTSQKSDEDDFVKVDDLPLQLTVMCEEELQKRIVEEQQNNNLSAEILN
GNTESLSGLVGNAHALKEPDTGGAQSV
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggaggcactccttttgatgacagtgcagaagagctgcacaactggactgta
accaatggcagtctggaagacagactcaacaacatggactggggtgtacagcagaagaaa
gccaaccgatcgtcagagaagaacaagaagaagctgtcagctggggtggtggagagccgc
ctgactaatgatatttcaccagagtccacccctggggccgggcgcaggagagcacgcact
cctcattcctttccccacatcaaatacaccactcagatgtctgtcccagaccaggctgag
ctggacaagctgcgtcagagaatcaatttcacagacttggatgagaggagcataggcagt
gactcccaaggacgtgtcacagctgccaacaaccagcggcagttagctggagagaacaag
aagccctacaacttcctacctctgcatgtaaacactaacaaaagcagggagctgctccct
ccttcctcctctgccccagccacaccagctaccaccaaggaaactaagaaacagggccca
ggactcagggatacatcaacccctttggttcctaccaaagatactccaaggctcagccgt
ggtggcaccgagagagggcccttagcgcacagagaatatgggagaggagagcagagaata
gacagcagccaggtggtgagcaaattggtacagatccgggagtacatcagtaaggccagc
tccatgcgggatgacctggtggagaagagtgatgtgccggccaacgtggagcgtctctca
catctcatcgaccacctcaaggagcaggagaagtcctatttacggttcctgcagaaaatg
ctgacacgggagaatgaggaggatgatgtggggaccctggactctgcagtgggctcaggt
tcactggcagagagcactactctgaacattgaggtctgctcttcagatgcctcaaatgca
accagctgtaggccagagatggtgcgatttgaccagaaggaagagttggagaatctgcgt
aagcagcacgagctgctgaaaaagatgctggagcagcaggagcagctcagggccctgcag
ggccgacaggaagcactaatggccatgcaggacagtgcagaacaggcactggctgtgatt
gaagacacagttgtcacagaaaccacaggaagtgtttcaggcctgagcatcacatcagaa
ctgaatgatgaattgaatgatttgatccagcggttccacaaccagctacatgactctcag
actaaagcagtgccagacaaccgtcgtcaggcagagagcctttctctctctagagaggtg
tgctggtctagggctccccaggctgttggtccacctcaacacaggcctctcctccactct
gcctctggtccccatactggcctagacacagggacaacagcagccagtgccaaactcact
aagcttaaagaactccaagacaaaaagcaaaccatggacaagatcctgcgggaactgcat
tcactcagagaccagacactcaataataacgcaagtcgtggtttgtcaacgcagtgcagt
ctcagtatgggaggatctgcagattgtccatctgctgtctgctctaatggggcctctgct
tccacttcctttcatccttcactcacgcaacaccaggatggctccaattccacagacaag
ctcaggaagctaaaggaggtccacaagcgtttgaatgagctgcgggaattggttcagtac
tacgagcagacttcggatatgatggtggatgcggtcaatgagaatgtgaaagaggatgat
gatgatgaggaacaggaggaggaagatgagacagaggacagttctatgtttgaggccatg
tttgactcagagcaggagaaccgccagcctataactaacatcagaaactcacagcgcggt
ggcaactggacagacttaaacagcctgaccaatgggcgcagtgtcaggagtagtgccact
aacaaccgtgatggtagactcaacactgagtgtgagatcaacaaccggtcggcagctaac
ctccgcagcctcaacatcccctcagctatagagtgccagtacaatagagacaccccttat
aatcgggtgaaggacaatgatgaggatgaagatgttctcgataatgatgacggagcacag
gctgtggctgcagacagtgaggcatctgggtctagtcgaagaagcagtctggggaatgat
ggcggttttgcccaaaaggttcatcggcacacagcaaagcagaaactccggcagcttcag
gagctggtggccatggttcagagtgatgacacagatggcacaacagctaatgaggatgaa
gctttacaccaacagccaaataataccagagctaatgtggctggatcgctgggggccata
tctaaacagaatcccagagaactcactctctctggcaaggccagggagaagctgtatgag
gagaagctgcgtcagcagaagcaggagctacaacagctccatgaagagcgccagaggctc
attgaaatccaaggcaaaatccaggaccttcagtgggcttgccctgacctccagtcatct
gtgtccagcacagtgagtcagcagggcttgctgaggaaggttccagttgcagtttccact
ccggccgctgtccaggcttcctcttcctcgggacccaaagccaactctgctgtgctcaaa
cccactgctccagaagcagctacttcttcagtcactgacaatgagcagctttggtcagag
atgcgccgccaccaaattttgcgtgaagaactgagacagcgcagaaagcacctagagtca
ttgatggctgaacaccagcggcgtagtggtctcattgactctccccggcagacggacgac
caagaaggccttgctacaccctcacagtctgtcagtagagatgaaaggacaatggctacc
tggggttcctctccctgccatcttgatgatgatgatgatgatgaggacgaggatgaatat
cgctcagagatgggtgcagaggaggaagaggagcaggatgaatgtgaggagagcagctct
gatgatgacatccacatatactcatccagcaggaaccagtgctcttacagtaacaggaag
aatcaaggaagcaacctgaagcctccacctgccttcttgggtgaaggaagtgggaattcg
cctcttcataacaagtctaaggccaatcagcagcagcagcagcagcagcagcagtccaga
agtttgaaccagtctgcgagccagcatggaggtacacgacggcaggagaacctgcgctgg
gcctctgagctctctttcaccgagggctcatgtcattggcaggaacaggtcagccagctg
cagagacagctggacttcagcaccagcatgtgtcagaccctcctgcaggaccagcagaca
ctctcttatatgttgcaaaccttgctgacaggtcagtacagtgtgttacccaacaacctg
tcatcaccacaagtccacttggtaatgcaccagctcaaccagtgttacacccagctgact
tggcagcaaaacaatgtacaaagactaaaacaggtcctgaatgacctcattcgccaacag
cagcatcagcagacttcaacagcaggttggcagacacagaagcatggctcatcccaggaa
tcccgttccagtccctcagcctctcctggtgtcttcctccccttctcctctaacctgcat
ccttcaaccaacaacatgtcaactgctgccttatccccattccttcccagtttaaactta
tttccactcttccctgcgcccatgggtgagttccctcagggggcggcaggtcaggcaatc
cctgaccaccagaagcagcagttggaccccaacacttctatcaaaacagagtacatgagt
ttccctcctccactgcagcgctctcctcttaataccaatactgagagaggatcggctggc
tgggttaaaccctcctacgcaaacaacaccgtccagcatcaccaatctaaaatggagccc
caagagtctccctcctcctcccccactttcgccaaccaccgcccccgacctcaagaattt
gacagggaatcacaggaaagcttcagcagcatgcctgatcacgttgatcccaccaccatc
acaaagacttttaaggccgggcgcaaggcctctgcacaagccaacctggcctcacgaacc
aagacacctaattctaagagtcgccgtaggaggagcaaagggcacaacaagaacagtgaa
ggccacgagagtgacagtgttagcagtactgcagactttgcccaggagagggcagccctg
tctcgtcagaaggaccagaataagagtctgttggacaagctgactcaagagaaacttgac
agcaaaactaagcttgggaacaaacaaaatgacctatcctctgcctatgcttggagaaca
cccttcctctctaacagaattgcatgcacagaagcaccagatgcgagcagtgacttctca
ctgtttgaagcactgagagagaccatctactctgaggtggctactttgatatcccagaat
gagtcccgtccccacttcctcatcgagctcttccatgagctgcagctgctcaacacagac
tacttacggcagagggcactgtattccctacaggatatagtgaccaggcacctggcagag
aagagtgcagctgaggaacagttgccccgtcttggtcctgtggtgtgggctgcaggctct
cagtctgagctcacacccagtgagagtctggctaccagtgatacagaggtggtggagaaa
aatttgaggctcacacaggacccaatgaagaagagggatgatgcagaatctgtggacaac
gacagcacgatgtcaacctcctccaacttggaaccatttgctaacgatgacctgggaaac
acggtgattcatttagacaaagctctggccaggattagggaatatgagcgcatgaagctt
aaagctgagtttaacccctgcagcaccagcactgcaggtgcaggtggctctgaagtctca
aatgctgaacatccttctgctaaccctgctgacccagcggaaggaggtgcagctggtgat
atgcgctgccctcagattgacacccagcagttggatcgtcagatcaaagctatcatgaca
gaggtcattcctttccttaaggagaacatggatgaggtgtgttccctccagctgctgaca
tgtgtgcggcgcatggttcttactctcacccaacacaacgatgaaagcaaggagtttgtt
cgctttttccacagacagctgggaggcatactgcaggactctcttagtaaatttgtgggc
cgtactctgaaggactgtggggaggaccttttggtggagatctcggagatcctcttcaat
gaactcgccttctttaggctcatgcaggatttggacaacagcagcagcatcgccaaacac
aaaaataagaagagggctgagcaacccagtaaagcaaagcacagtctcaaggaaaataca
atagctggtggtaataaatcagtttctccagcctacacagatgaagacaaggaccaagat
gaagctgagcaggaaggtgattctactctccgggacctttacctgcagacagagaggaag
aacagcaggagcagtgcttcagaggttgaagaggaagatgaggatgaaggggatagacaa
ggaatgcctctgtcaatcagtctttccaaagcagagactcaggccctgacaaactacggc
agtggagaagacgagaatgaggaggaggaaatggaggagtttgaagctggacctgttgat
gtgcaaacatcattacaggcttccgccgatggacaggtggagcaggaggggacaagaccc
agcgaaacccaggagaccaaaactgagcaggggagttcagagaaagaggatgctgaaatc
aaccagtcagtggggactacagattccacagtggaggaccgtgacacggcggcgtatcag
agtcctgaggaggagagtaaagctggggcagctgctacttcggaaggaagctctgcagtc
ttccatgatcaggatttccaaaaggaaacaaccactactagcagccccgacacagactca
cccgtcatgatcaatgtagatgagatgggctcaggtaacaccagtcagaaatctgatgag
gacgactttgttaaggtggatgacttaccactgcagcttacagtcatgtgtgaggaggaa
ctacagaagagaatagtagaggagcagcagaataacaacctgtctgcagagatcctcaat
ggaaacacggaatcgctgtctgggctggtgggaaatgcgcatgcactgaaggaacccgac
accggcggtgcccagagtgtctaa
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integrated database retrieval system
